Information for 15-GGCCAGGCGGGCT (Motif 29)

A C T G A C T G A T G C A G T C C G T A A C T G A C T G A G T C A T C G A C T G A C T G A T G C A C G T
Reverse Opposite:
C G T A A T C G A G T C A G T C A T G C A C T G A G T C A G T C A C G T A C T G A T C G A G T C A G T C
p-value:1e-6
log p-value:-1.478e+01
Information Content per bp:1.924
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.8 +/- 17.8bp
Average Position of motif in Background58.1 +/- 5.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:GGCCAGGCGGGCT
-----GGCGCGCT
 A C T G A C T G A T G C A G T C C G T A A C T G A C T G A G T C A T C G A C T G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGCCAGGCGGGCT---
NAGANTGGCGGGGNGNA
 A C G T A C T G A C T G A T G C A G T C C G T A A C T G A C T G A G T C A T C G A C T G A C T G A T G C A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

ZEB1/MA0103.2/Jaspar

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGCCAGGCGGGCT
---CAGGTGAGG-
 A C T G A C T G A T G C A G T C C G T A A C T G A C T G A G T C A T C G A C T G A C T G A T G C A C G T
A C G T A C G T A C G T A G T C C G T A A C T G A C T G A C G T C T A G G C T A C T A G A C T G A C G T

SP2/MA0516.1/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GGCCAGGCGGGCT
GGGNGGGGGCGGGGC
 A C G T A C G T A C T G A C T G A T G C A G T C C G T A A C T G A C T G A G T C A T C G A C T G A C T G A T G C A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGCCAGGCGGGCT
--CCAGACRSVB-
 A C T G A C T G A T G C A G T C C G T A A C T G A C T G A G T C A T C G A C T G A C T G A T G C A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGCCAGGCGGGCT
--CCAGACAG---
 A C T G A C T G A T G C A G T C C G T A A C T G A C T G A G T C A T C G A C T G A C T G A T G C A C G T
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGCCAGGCGGGCT
-NNCAGGTGNN--
 A C T G A C T G A T G C A G T C C G T A A C T G A C T G A G T C A T C G A C T G A C T G A T G C A C G T
A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

GCM2/MA0767.1/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGCCAGGCGGGCT
---TATGCGGGTA
 A C T G A C T G A T G C A G T C C G T A A C T G A C T G A G T C A T C G A C T G A C T G A T G C A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGCCAGGCGGGCT
TGCCCTGAGGGCA
 A C T G A C T G A T G C A G T C C G T A A C T G A C T G A G T C A T C G A C T G A C T G A T G C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:10
Score:0.53
Offset:3
Orientation:forward strand
Alignment:GGCCAGGCGGGCT
---CWGGCGGGAA
 A C T G A C T G A T G C A G T C C G T A A C T G A C T G A G T C A T C G A C T G A C T G A T G C A C G T
A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A