Information for 12-GTAGGTGCAAAGG (Motif 26)

A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C G T A C G T A C T G A G T C C G T A A G T C A G T C A C G T C G T A A G T C
p-value:1e-6
log p-value:-1.478e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.8 +/- 27.8bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBX20/MA0689.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTAGGTGCAAAGG
-TAGGTGTGAAG-
 A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G
A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTAGGTGCAAAGG---
-AGAGTCCAAAGTCCA
 A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GTAGGTGCAAAGG
--AGGTGTTAAT-
 A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G
A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GTAGGTGCAAAGG---
--TGGGGCAAAGGTCA
 A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTAGGTGCAAAGG
--AGGTGTCA---
 A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTAGGTGCAAAGG
SDGCAGGTGCNS---
 A C G T A C G T A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTAGGTGCAAAGG--
NTNTATGTGCACATNNN
 A C G T A C G T A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

TBX2/MA0688.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTAGGTGCAAAGG
-AAGGTGTGAAA-
 A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G
A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTAGGTGCAAAGG
-AAGGTGTKAA--
 A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G
A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GTAGGTGCAAAGG
--AGGTGTGAAA-
 A C T G A C G T C G T A A C T G A C T G A C G T A C T G A G T C C G T A C G T A C G T A A C T G A C T G
A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T