Information for 8-MBTCTTGKCH (Motif 23)

T G A C A G C T A C G T A T G C C G A T C A G T A C T G A C T G A G T C G A T C
Reverse Opposite:
C T A G T C A G T G A C T G A C G T C A G C T A A T C G T G C A T C G A A C T G
p-value:1e-7
log p-value:-1.704e+01
Information Content per bp:1.572
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif3.01%
Number of Background Sequences with motif183.2
Percentage of Background Sequences with motif0.49%
Average Position of motif in Targets60.3 +/- 25.4bp
Average Position of motif in Background50.6 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIX/MA0671.1/Jaspar

Match Rank:1
Score:0.71
Offset:3
Orientation:reverse strand
Alignment:MBTCTTGKCH--
---NTTGGCANN
 T G A C A G C T A C G T A T G C C G A T C A G T A C T G A C T G A G T C G A T C A C G T A C G T
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:2
Score:0.68
Offset:4
Orientation:forward strand
Alignment:MBTCTTGKCH
----TTGGCA
 T G A C A G C T A C G T A T G C C G A T C A G T A C T G A C T G A G T C G A T C
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:MBTCTTGKCH-
---CTTGGCAA
 T G A C A G C T A C G T A T G C C G A T C A G T A C T G A C T G A G T C G A T C A C G T
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:MBTCTTGKCH--
--NNTTGGCANN
 T G A C A G C T A C G T A T G C C G A T C A G T A C T G A C T G A G T C G A T C A C G T A C G T
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:MBTCTTGKCH-
NNACTTGCCTT
 T G A C A G C T A C G T A T G C C G A T C A G T A C T G A C T G A G T C G A T C A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:MBTCTTGKCH-
--TNNGGGCAG
 T G A C A G C T A C G T A T G C C G A T C A G T A C T G A C T G A G T C G A T C A C G T
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---MBTCTTGKCH-
TCACCTCTGGGCAG
 A C G T A C G T A C G T T G A C A G C T A C G T A T G C C G A T C A G T A C T G A C T G A G T C G A T C A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:MBTCTTGKCH-
--GGTTGGCAT
 T G A C A G C T A C G T A T G C C G A T C A G T A C T G A C T G A G T C G A T C A C G T
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:MBTCTTGKCH--
----TWGTCTGV
 T G A C A G C T A C G T A T G C C G A T C A G T A C T G A C T G A G T C G A T C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:MBTCTTGKCH---
-----TGTCANYT
 T G A C A G C T A C G T A T G C C G A T C A G T A C T G A C T G A G T C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T