Information for 8-CTCCCTGSTGWGT (Motif 22)

A G T C A C G T A G T C A G T C G A T C A C G T A C T G A T C G A C G T A T C G G C A T A T C G A G C T
Reverse Opposite:
C T G A A T G C C G T A A T G C G T C A A T G C A G T C C G T A C A T G A C T G A C T G C G T A A C T G
p-value:1e-7
log p-value:-1.791e+01
Information Content per bp:1.803
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif32.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets54.6 +/- 22.5bp
Average Position of motif in Background44.9 +/- 36.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.38
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:CTCCCTGSTGWGT
CCCCCTGCTGTG-
 A G T C A C G T A G T C A G T C G A T C A C G T A C T G A T C G A C G T A T C G G C A T A T C G A G C T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CTCCCTGSTGWGT
GGCCYCCTGCTGDGH
 A C G T A C G T A G T C A C G T A G T C A G T C G A T C A C G T A C T G A T C G A C G T A T C G G C A T A T C G A G C T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CTCCCTGSTGWGT
GACCCCCCGCTGTG-
 A C G T A C G T A G T C A C G T A G T C A G T C G A T C A C G T A C T G A T C G A C G T A T C G G C A T A T C G A G C T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTCCCTGSTGWGT
GACCCCCCGCTGCGC
 A C G T A C G T A G T C A C G T A G T C A G T C G A T C A C G T A C T G A T C G A C G T A T C G G C A T A T C G A G C T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTCCCTGSTGWGT--
TCNCCTGCTGNGNNN
 A G T C A C G T A G T C A G T C G A T C A C G T A C T G A T C G A C G T A T C G G C A T A T C G A G C T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0205.1_Zic1_2/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTCCCTGSTGWGT--
TNTCCTGCTGTGNNG
 A G T C A C G T A G T C A G T C G A T C A C G T A C T G A T C G A C G T A T C G G C A T A T C G A G C T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

ZIC4/MA0751.1/Jaspar

Match Rank:7
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTCCCTGSTGWGT
GACCCCCCGCTGTGC
 A C G T A C G T A G T C A C G T A G T C A G T C G A T C A C G T A C T G A T C G A C G T A T C G G C A T A T C G A G C T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CTCCCTGSTGWGT
---CCTGCTGAGH
 A G T C A C G T A G T C A G T C G A T C A C G T A C T G A T C G A C G T A T C G G C A T A T C G A G C T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

PB0207.1_Zic3_2/Jaspar

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTCCCTGSTGWGT--
NNTCCTGCTGTGNNN
 A G T C A C G T A G T C A G T C G A T C A C G T A C T G A T C G A C G T A T C G G C A T A T C G A G C T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTCCCTGSTGWGT
-TCCCNNGGGACN
 A G T C A C G T A G T C A G T C G A T C A C G T A C T G A T C G A C G T A T C G G C A T A T C G A G C T
A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C