Information for 12-GCACCATGGGCAGTGT (Motif 21)

A C T G A G T C C G T A A G T C G A T C T C G A A C G T A C T G A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G C T
Reverse Opposite:
C T G A A G T C C G T A A G T C C G A T A C T G A G T C G T A C A G T C C G T A A C G T C T A G C T A G A C G T A C T G A G T C
p-value:1e-8
log p-value:-1.844e+01
Information Content per bp:1.915
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.2 +/- 24.4bp
Average Position of motif in Background73.1 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX8/MA0868.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCACCATGGGCAGTGT-
-AACAATGTGCAGTGTT
 A C T G A G T C C G T A A G T C G A T C T C G A A C G T A C T G A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G C T A C G T
A C G T C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GCACCATGGGCAGTGT-
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C G A T C T C G A A C G T A C T G A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G C T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCACCATGGGCAGTGT-
TCAGCACCATGGACAGCTCC
 A C G T A C G T A C G T A C T G A G T C C G T A A G T C G A T C T C G A A C G T A C T G A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G C T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCACCATGGGCAGTGT
RGSMTBCTGGGAAAT--
 A C G T A C T G A G T C C G T A A G T C G A T C T C G A A C G T A C T G A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G C T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCACCATGGGCAGTGT
TGCCCTNAGGGCA----
 A C G T A C T G A G T C C G T A A G T C G A T C T C G A A C G T A C T G A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G C T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

TFAP2C(var.3)/MA0815.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCACCATGGGCAGTGT
TGCCCTNAGGGCA----
 A C G T A C T G A G T C C G T A A G T C G A T C T C G A A C G T A C T G A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G C T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCACCATGGGCAGTGT
TGCCCNNAGGGCA----
 A C G T A C T G A G T C C G T A A G T C G A T C T C G A A C G T A C T G A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G C T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A A C G T A C G T A C G T A C G T

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCACCATGGGCAGTGT----
GCATTCTGGGAATTGTAGTT
 A C T G A G T C C G T A A G T C G A T C T C G A A C G T A C T G A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G C T A C G T A C G T A C G T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

ZNF143/MA0088.2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCACCATGGGCAGTGT
CAATGCATTGTGGGTA----
 A C G T A C G T A C G T A C G T A C T G A G T C C G T A A G T C G A T C T C G A A C G T A C T G A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G C T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GCACCATGGGCAGTGT
NNTNNACAATGGGANNN--
 A C G T A C G T A C G T A C T G A G T C C G T A A G T C G A T C T C G A A C G T A C T G A C T G A C T G A G T C C G T A A C T G A C G T A C T G A G C T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A A C G T A C G T