Information for 5-GCACGTGTAC (Motif 16)

T C A G T A G C T G C A A G T C T C A G A C G T T A C G A G C T T C G A G A T C
Reverse Opposite:
C T A G A G C T T C G A A T G C T G C A A G T C T C A G A C G T A T C G A G T C
p-value:1e-8
log p-value:-1.971e+01
Information Content per bp:1.544
Number of Target Sequences with motif83.0
Percentage of Target Sequences with motif16.67%
Number of Background Sequences with motif3186.7
Percentage of Background Sequences with motif8.47%
Average Position of motif in Targets48.7 +/- 25.3bp
Average Position of motif in Background49.7 +/- 47.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.28
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Npas2/MA0626.1/Jaspar

Match Rank:1
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-GCACGTGTAC
GGCACGTGTC-
 A C G T T C A G T A G C T G C A A G T C T C A G A C G T T A C G A G C T T C G A G A T C
C T A G T A C G A G T C C G T A G T A C C T A G A C G T C T A G A C G T G T A C A C G T

Mlxip/MA0622.1/Jaspar

Match Rank:2
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GCACGTGTAC
GCACGTGT--
 T C A G T A G C T G C A A G T C T C A G A C G T T A C G A G C T T C G A G A T C
A C T G A G T C C G T A A G T C A C T G A C G T A C T G C A G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:GCACGTGTAC
-CACGTGBN-
 T C A G T A G C T G C A A G T C T C A G A C G T T A C G A G C T T C G A G A T C
A C G T G T A C C T G A A G T C C T A G G C A T C A T G A C G T G C T A A C G T

MNT/MA0825.1/Jaspar

Match Rank:4
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-GCACGTGTAC
NGCACGTGNT-
 A C G T T C A G T A G C T G C A A G T C T C A G A C G T T A C G A G C T T C G A G A T C
C T A G A C T G G T A C G T C A A G T C T C A G C G A T C A T G A T C G G A C T A C G T

Id2/MA0617.1/Jaspar

Match Rank:5
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GCACGTGTAC
GCACGTGA--
 T C A G T A G C T G C A A G T C T C A G A C G T T A C G A G C T T C G A G A T C
T C A G A G T C C G T A A G T C A C T G A C G T A C T G C T G A A C G T A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--GCACGTGTAC
NGKCACGTGM--
 A C G T A C G T T C A G T A G C T G C A A G T C T C A G A C G T T A C G A G C T T C G A G A T C
T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C A C G T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:7
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-GCACGTGTAC
GGCACGTGTC-
 A C G T T C A G T A G C T G C A A G T C T C A G A C G T T A C G A G C T T C G A G A T C
A C T G T C A G G A T C T C G A A T G C A C T G A G C T T C A G A G C T A T G C A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:8
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-GCACGTGTAC
GNCACGTG---
 A C G T T C A G T A G C T G C A A G T C T C A G A C G T T A C G A G C T T C G A G A T C
C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T

Arnt/MA0004.1/Jaspar

Match Rank:9
Score:0.81
Offset:1
Orientation:forward strand
Alignment:GCACGTGTAC
-CACGTG---
 T C A G T A G C T G C A A G T C T C A G A C G T T A C G A G C T T C G A G A T C
A C G T G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T

MAX/MA0058.3/Jaspar

Match Rank:10
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-GCACGTGTAC
NNCACGTGGT-
 A C G T T C A G T A G C T G C A A G T C T C A G A C G T T A C G A G C T T C G A G A T C
C T G A T A C G T G A C C T G A A G T C T C A G G A C T A C T G A C T G A C G T A C G T