Information for 4-ATTGTGTGTA (Motif 15)

G C T A A G C T A C G T A C T G A C G T A C T G A G C T T A C G A C G T C G T A
Reverse Opposite:
G C A T G T C A A T G C T C G A A G T C G T C A A G T C G T C A C T G A C G A T
p-value:1e-8
log p-value:-2.036e+01
Information Content per bp:1.817
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif3.01%
Number of Background Sequences with motif142.3
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets42.2 +/- 20.0bp
Average Position of motif in Background51.3 +/- 46.4bp
Strand Bias (log2 ratio + to - strand density)2.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0168.1_Sox14_2/Jaspar

Match Rank:1
Score:0.77
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTGTGTA
NNNCCATTGTGTNAN
 A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T A C T G A C G T A C T G A G C T T A C G A C G T C G T A
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Sox17/MA0078.1/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---ATTGTGTGTA
CTCATTGTC----
 A C G T A C G T A C G T G C T A A G C T A C G T A C T G A C G T A C T G A G C T T A C G A C G T C G T A
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T

Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ATTGTGTGTA---
CCATTGTATGCAAAT
 A C G T A C G T G C T A A G C T A C G T A C T G A C G T A C T G A G C T T A C G A C G T C G T A A C G T A C G T A C G T
A G T C G A T C G C T A C G A T A C G T T A C G G C A T C T G A G A C T A C T G A G T C G C T A C T G A T C G A C A G T

PB0183.1_Sry_2/Jaspar

Match Rank:4
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----ATTGTGTGTA--
CNNNTATTGTTCNNNNN
 A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T A C T G A C G T A C T G A G C T T A C G A C G T C G T A A C G T A C G T
A T G C C T G A A G T C A G T C G A C T C G T A A C G T A G C T T C A G G C A T A C G T A G T C G T A C C A T G G C A T C T A G C T G A

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATTGTGTGTA
CCATTGTTYB--
 A C G T A C G T G C T A A G C T A C G T A C T G A C G T A C T G A G C T T A C G A C G T C G T A
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATTGTGTGTA
CCATTGTTNY--
 A C G T A C G T G C T A A G C T A C G T A C T G A C G T A C T G A G C T T A C G A C G T C G T A
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ATTGTGTGTA
NCCATTGTTY---
 A C G T A C G T A C G T G C T A A G C T A C G T A C T G A C G T A C T G A G C T T A C G A C G T C G T A
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:8
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATTGTGTGTA
ATTGTTTAN-
 G C T A A G C T A C G T A C T G A C G T A C T G A G C T T A C G A C G T C G T A
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ATTGTGTGTA
ATTGTT----
 G C T A A G C T A C G T A C T G A C G T A C T G A G C T T A C G A C G T C G T A
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATTGTGTGTA
CCWTTGTYYB--
 A C G T A C G T G C T A A G C T A C G T A C T G A C G T A C T G A G C T T A C G A C G T C G T A
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T