Information for 3-AGTGGCGGCA (Motif 11)

C G T A A C T G A C G T A C T G A C T G A G T C A C T G C T A G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G T C A C T G A G T C A G T C C G T A A G T C A C G T
p-value:1e-8
log p-value:-2.050e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets71.8 +/- 25.8bp
Average Position of motif in Background43.2 +/- 13.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGCGGCA----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C T G A G T C A C T G C T A G A G T C C G T A A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0164.1_Smad3_2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGCGGCA----
NAGANTGGCGGGGNGNA
 A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C T G A G T C A C T G C T A G A G T C C G T A A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGCGGCA----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C T G A G T C A C T G C T A G A G T C C G T A A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

YY2/MA0748.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AGTGGCGGCA
TAATGGCGGNC
 A C G T C G T A A C T G A C G T A C T G A C T G A G T C A C T G C T A G A G T C C G T A
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

E2F1/MA0024.3/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGTGGCGGCA--
TTTGGCGCCAAA
 C G T A A C T G A C G T A C T G A C T G A G T C A C T G C T A G A G T C C G T A A C G T A C G T
G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGTGGCGGCA
TTRAGTGSYK---
 A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C T G A G T C A C T G C T A G A G T C C G T A
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

CRE(bZIP)/Promoter/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGTGGCGGCA---
-GTGACGTCACCG
 C G T A A C T G A C G T A C T G A C T G A G T C A C T G C T A G A G T C C G T A A C G T A C G T A C G T
A C G T T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGTGGCGGCA-
-CWGGCGGGAA
 C G T A A C T G A C G T A C T G A C T G A G T C A C T G C T A G A G T C C G T A A C G T
A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGTGGCGGCA--
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A C G T C G T A A C T G A C G T A C T G A C T G A G T C A C T G C T A G A G T C C G T A A C G T A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

CREB1/MA0018.2/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGTGGCGGCA
--TGACGTCA
 C G T A A C T G A C G T A C T G A C T G A G T C A C T G C T A G A G T C C G T A
A C G T A C G T G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A