Information for 2-AGAGGTGAAA (Motif 5)

C T G A T A C G C G T A A C T G C A T G C G A T A T C G T C G A T G C A C G T A
Reverse Opposite:
C G A T A C G T A G C T T A G C C G T A G T A C A G T C A C G T A T G C A G C T
p-value:1e-10
log p-value:-2.420e+01
Information Content per bp:1.841
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.94%
Number of Background Sequences with motif92.2
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets52.1 +/- 23.3bp
Average Position of motif in Background49.3 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-AGAGGTGAAA-
CGGAAGTGAAAC
 A C G T C T G A T A C G C G T A A C T G C A T G C G A T A T C G T C G A T G C A C G T A A C G T
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGAGGTGAAA--
GGAAGTGAAAST
 C T G A T A C G C G T A A C T G C A T G C G A T A T C G T C G A T G C A C G T A A C G T A C G T
C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AGAGGTGAAA
--AGGTGTCA
 C T G A T A C G C G T A A C T G C A T G C G A T A T C G T C G A T G C A C G T A
A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGAGGTGAAA
AGRGGTCA--
 C T G A T A C G C G T A A C T G C A T G C G A T A T C G T C G A T G C A C G T A
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AGAGGTGAAA--
CAAAGGTCAAGGG
 A C G T C T G A T A C G C G T A A C T G C A T G C G A T A T C G T C G A T G C A C G T A A C G T A C G T
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:forward strand
Alignment:AGAGGTGAAA--
--AGGTGTGAAM
 C T G A T A C G C G T A A C T G C A T G C G A T A T C G T C G A T G C A C G T A A C G T A C G T
A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

PB0118.1_Esrra_2/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AGAGGTGAAA---
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T C T G A T A C G C G T A A C T G C A T G C G A T A T C G T C G A T G C A C G T A A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----AGAGGTGAAA--
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T C T G A T A C G C G T A A C T G C A T G C G A T A T C G T C G A T G C A C G T A A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

TBX4/MA0806.1/Jaspar

Match Rank:9
Score:0.64
Offset:2
Orientation:forward strand
Alignment:AGAGGTGAAA
--AGGTGTGA
 C T G A T A C G C G T A A C T G C A T G C G A T A T C G T C G A T G C A C G T A
A C G T A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:10
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AGAGGTGAAA--
--AGGTGTTAAT
 C T G A T A C G C G T A A C T G C A T G C G A T A T C G T C G A T G C A C G T A A C G T A C G T
A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T