Information for 13-TGACCCGACT (Motif 23)

A C G T A C T G C G T A A T G C A G T C A G T C A C T G C G T A A G T C A G C T
Reverse Opposite:
C T G A A C T G A C G T A G T C C T A G A C T G A T C G A C G T A G T C C G T A
p-value:1e-3
log p-value:-8.960e+00
Information Content per bp:1.903
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif26.7
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets51.3 +/- 28.3bp
Average Position of motif in Background48.7 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0157.1_Rara_2/Jaspar

Match Rank:1
Score:0.79
Offset:-4
Orientation:reverse strand
Alignment:----TGACCCGACT--
NNCNTGACCCCGCTCT
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A T G C A G T C A G T C A C T G C G T A A G T C A G C T A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.78
Offset:-4
Orientation:reverse strand
Alignment:----TGACCCGACT--
NNNNTGACCCGGCGCG
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A A T G C A G T C A G T C A C T G C G T A A G T C A G C T A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGACCCGACT
TGACCT----
 A C G T A C T G C G T A A T G C A G T C A G T C A C T G C G T A A G T C A G C T
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGACCCGACT
TGACCTYA--
 A C G T A C T G C G T A A T G C A G T C A G T C A C T G C G T A A G T C A G C T
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TGACCCGACT--
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A T G C A G T C A G T C A C T G C G T A A G T C A G C T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGACCCGACT
TGACCYCT--
 A C G T A C T G C G T A A T G C A G T C A G T C A C T G C G T A A G T C A G C T
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGACCCGACT
ATCACCCCAC-
 A C G T A C G T A C T G C G T A A T G C A G T C A G T C A C T G C G T A A G T C A G C T
T C G A A C G T A G T C C G T A A T G C T A G C A G T C T A G C C G T A A G T C A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TGACCCGACT--
NNANTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A T G C A G T C A G T C A C T G C G T A A G T C A G C T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

RHOXF1/MA0719.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGACCCGACT
ATAATCCC---
 A C G T A C G T A C T G C G T A A T G C A G T C A G T C A C T G C G T A A G T C A G C T
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T

PB0179.1_Sp100_2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TGACCCGACT--
NNTTTANNCGACGNA
 A C G T A C G T A C G T A C G T A C T G C G T A A T G C A G T C A G T C A C T G C G T A A G T C A G C T A C G T A C G T
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A