Information for 3-TAGGCAGAGG (Motif 11)

G A C T C G T A A C T G A T C G A G T C C G T A A T C G T G C A T A C G C A T G
Reverse Opposite:
G T A C A T G C A C G T A T G C C G A T A C T G A T G C T G A C C G A T C T G A
p-value:1e-9
log p-value:-2.243e+01
Information Content per bp:1.766
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.78%
Number of Background Sequences with motif237.6
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets51.3 +/- 26.7bp
Average Position of motif in Background48.5 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TAGGCAGAGG---
---CCAGACRSVB
 G A C T C G T A A C T G A T C G A G T C C G T A A T C G T G C A T A C G C A T G A C G T A C G T A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TAGGCAGAGG----
CAGGCCNNGGCCNN
 G A C T C G T A A C T G A T C G A G T C C G T A A T C G T G C A T A C G C A T G A C G T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TAGGCAGAGG---------
YCAGGCWCAGTACCAGGCTC
 A C G T G A C T C G T A A C T G A T C G A G T C C G T A A T C G T G C A T A C G C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C T G A C G C T A C T A G C T A G G A T C G C A T A T G C C G T A C T A G C A G T T C G A A T G C A G T C C G T A C A T G C T A G G T A C G A C T A T G C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TAGGCAGAGG
ATGCCAGACN
 G A C T C G T A A C T G A T C G A G T C C G T A A T C G T G C A T A C G C A T G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TAGGCAGAGG-
---CCAGACAG
 G A C T C G T A A C T G A T C G A G T C C G T A A T C G T G C A T A C G C A T G A C G T
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

ZBTB18/MA0698.1/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TAGGCAGAGG---
CATCCAGATGTTC
 G A C T C G T A A C T G A T C G A G T C C G T A A T C G T G C A T A C G C A T G A C G T A C G T A C G T
G T A C C G T A A C G T T G A C G T A C C G T A A T C G G T C A A C G T C T A G G A C T C A G T A G T C

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TAGGCAGAGG
NNTTGGCANN--
 A C G T A C G T G A C T C G T A A C T G A T C G A G T C C G T A A T C G T G C A T A C G C A T G
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TAGGCAGAGG
CCAGGAACAG-
 A C G T G A C T C G T A A C T G A T C G A G T C C G T A A T C G T G C A T A C G C A T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TAGGCAGAGG------
AAGGCCAGATGGTCCGG
 A C G T G A C T C G T A A C T G A T C G A G T C C G T A A T C G T G C A T A C G C A T G A C G T A C G T A C G T A C G T A C G T A C G T
G C T A T C G A C T A G C A T G T A G C G T A C C T G A A C T G T C G A C G A T A C T G C A T G A G C T G A T C A T G C A T C G T C A G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TAGGCAGAGG
CTTGGCAA---
 A C G T G A C T C G T A A C T G A T C G A G T C C G T A A T C G T G C A T A C G C A T G
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T