p-value: | 1e-10 |
log p-value: | -2.425e+01 |
Information Content per bp: | 1.860 |
Number of Target Sequences with motif | 11.0 |
Percentage of Target Sequences with motif | 1.24% |
Number of Background Sequences with motif | 31.1 |
Percentage of Background Sequences with motif | 0.06% |
Average Position of motif in Targets | 42.7 +/- 26.1bp |
Average Position of motif in Background | 49.4 +/- 31.9bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer
Match Rank: | 1 |
Score: | 0.63 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | AGAAAGATTA- ---RGGATTAR |
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Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | AGAAAGATTA--- -GWAAYHTGAKMC |
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OTX2/MA0712.1/Jaspar
Match Rank: | 3 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AGAAAGATTA- ---NGGATTAA |
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Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer
Match Rank: | 4 |
Score: | 0.62 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AGAAAGATTA-- --VRGGATTARN |
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Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer
Match Rank: | 5 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGAAAGATTA ANGNAAAGGTCA |
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VENTX/MA0724.1/Jaspar
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AGAAAGATTA- --ACCGATTAG |
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PB0062.1_Sox12_1/Jaspar
Match Rank: | 7 |
Score: | 0.61 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----AGAAAGATTA NTTNAGAACAATTA |
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PB0072.1_Sox5_1/Jaspar
Match Rank: | 8 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---AGAAAGATTA--- TTTAGAACAATAAAAT |
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Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer
Match Rank: | 9 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGAAAGATTA--- -GWAAYHTGABMC |
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Arid5a/MA0602.1/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AGAAAGATTA- NNTNNCAATATTAG |
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