Information for 6-SYCGCKGACCTGG (Motif 15)

A T C G A G T C A G T C A C T G A G T C A C G T A C T G G T C A A G T C A G T C A C G T A C T G A C T G
Reverse Opposite:
G T A C A G T C C G T A A C T G A C T G A C G T A G T C G T C A A C T G A G T C A C T G C T A G A T G C
p-value:1e-8
log p-value:-2.055e+01
Information Content per bp:1.901
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif10.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.9 +/- 19.4bp
Average Position of motif in Background58.4 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:SYCGCKGACCTGG
-NCGCGGACGTTG
 A T C G A G T C A G T C A C T G A G T C A C G T A C T G G T C A A G T C A G T C A C G T A C T G A C T G
A C G T T G A C G T A C T A C G T A G C C T A G A T C G C G T A T A G C T A C G A G C T A C G T T A C G

ZEB1/MA0103.2/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:SYCGCKGACCTGG
---CCTCACCTG-
 A T C G A G T C A G T C A C T G A G T C A C G T A C T G G T C A A G T C A G T C A C G T A C T G A C T G
A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:SYCGCKGACCTGG
-----TGACCT--
 A T C G A G T C A G T C A C T G A G T C A C G T A C T G G T C A A G T C A G T C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:SYCGCKGACCTGG
---RYHYACCTGB
 A T C G A G T C A G T C A C T G A G T C A C G T A C T G G T C A A G T C A G T C A C G T A C T G A C T G
A C G T A C G T A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:SYCGCKGACCTGG--
-----TGACCTTGAT
 A T C G A G T C A G T C A C T G A G T C A C G T A C T G G T C A A G T C A G T C A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:SYCGCKGACCTGG-----
---GCTGACCTTGAACTN
 A T C G A G T C A G T C A C T G A G T C A C G T A C T G G T C A A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:forward strand
Alignment:SYCGCKGACCTGG-
----NTGACCTTGA
 A T C G A G T C A G T C A C T G A G T C A C G T A C T G G T C A A G T C A G T C A C G T A C T G A C T G A C G T
A C G T A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:SYCGCKGACCTGG--
-----TGACCTTGAV
 A T C G A G T C A G T C A C T G A G T C A C G T A C T G G T C A A G T C A G T C A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:9
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:SYCGCKGACCTGG
-----TGACCTYA
 A T C G A G T C A G T C A C T G A G T C A C G T A C T G G T C A A G T C A G T C A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

XBP1/MA0844.1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:SYCGCKGACCTGG----
---GATGACGTGGCANT
 A T C G A G T C A G T C A C T G A G T C A C G T A C T G G T C A A G T C A G T C A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C A G T G C A G A C T A C T G T C G A G A T C C T A G G A C T T C A G C A T G G T A C T G C A G A C T G C A T