Information for 6-CATACTCACCATC (Motif 9)

A G T C C G T A A C G T C G T A A T G C A C G T G A T C G T C A A T G C A G T C C G T A A C G T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C T G A T C G A C G T C A T G C G T A A T C G A C G T C G T A A C G T C T A G
p-value:1e-7
log p-value:-1.698e+01
Information Content per bp:1.864
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets59.8 +/- 26.2bp
Average Position of motif in Background64.9 +/- 0.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CATACTCACCATC
-NNACTTACCTN-
 A G T C C G T A A C G T C G T A A T G C A C G T G A T C G T C A A T G C A G T C C G T A A C G T A G T C
A C G T C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T

PH0017.1_Cux1_2/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CATACTCACCATC----
--TAGTGATCATCATTA
 A G T C C G T A A C G T C G T A A T G C A C G T G A T C G T C A A T G C A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G C T A C A T G A G C T C A T G G C T A C G A T G A T C C G T A C A G T G A T C T C G A A G C T A C G T G C T A

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CATACTCACCATC
-BTVATTWGCATA
 A G T C C G T A A C G T C G T A A T G C A C G T G A T C G T C A A T G C A G T C C G T A A C G T A G T C
A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A

MAFK/MA0496.1/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CATACTCACCATC--
CTGAGTCAGCAATTT
 A G T C C G T A A C G T C G T A A T G C A C G T G A T C G T C A A T G C A G T C C G T A A C G T A G T C A C G T A C G T
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

MAFF/MA0495.1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CATACTCACCATC----
GCTGAGTCAGCAATTTTT
 A C G T A G T C C G T A A C G T C G T A A T G C A C G T G A T C G T C A A T G C A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CATACTCACCATC----
-------ACCATCTGTT
 A G T C C G T A A C G T C G T A A T G C A C G T G A T C G T C A A T G C A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CATACTCACCATC-
----TTCCCCCTAC
 A G T C C G T A A C G T C G T A A T G C A C G T G A T C G T C A A T G C A G T C C G T A A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C

PH0022.1_Dlx3/Jaspar

Match Rank:8
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CATACTCACCATC
TCGCGATAATTACCGAC
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A T G C A C G T G A T C G T C A A T G C A G T C C G T A A C G T A G T C
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

PH0023.1_Dlx4/Jaspar

Match Rank:9
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----CATACTCACCATC
GCGCTATAATTACCGAC
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A A T G C A C G T G A T C G T C A A T G C A G T C C G T A A C G T A G T C
A C G T G T A C T C A G T G A C C A G T C T G A G A C T C G T A C G T A C G A T A C G T C T G A G T A C G T A C T A C G G C T A G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:10
Score:0.50
Offset:7
Orientation:forward strand
Alignment:CATACTCACCATC----
-------GCCATCTGTT
 A G T C C G T A A C G T C G T A A T G C A C G T G A T C G T C A A T G C A G T C C G T A A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T