Information for 3-TCCTVCCCBTGATCCA (Motif 7)

A C G T A G T C G T A C C G A T T A G C A G T C A G T C G T A C A C T G C G A T A T C G G T C A A C G T A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G C G T A A C G T A T G C C G T A T A G C A C T G A C T G C T A G A C T G C G T A A C T G C T A G C G T A
p-value:1e-7
log p-value:-1.796e+01
Information Content per bp:1.779
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.8 +/- 31.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.60
Offset:8
Orientation:forward strand
Alignment:TCCTVCCCBTGATCCA
--------ATAATCCC
 A C G T A G T C G T A C C G A T T A G C A G T C A G T C G T A C A C T G C G A T A T C G G T C A A C G T A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.58
Offset:6
Orientation:forward strand
Alignment:TCCTVCCCBTGATCCA
------CNGTCCTCCC
 A C G T A G T C G T A C C G A T T A G C A G T C A G T C G T A C A C T G C G A T A T C G G T C A A C G T A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.57
Offset:11
Orientation:forward strand
Alignment:TCCTVCCCBTGATCCA-
-----------ATCCAC
 A C G T A G T C G T A C C G A T T A G C A G T C A G T C G T A C A C T G C G A T A T C G G T C A A C G T A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

ZNF263/MA0528.1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---TCCTVCCCBTGATCCA--
TCCTCCTCCCCCTCCTCCTCC
 A C G T A C G T A C G T A C G T A G T C G T A C C G A T T A G C A G T C A G T C G T A C A C T G C G A T A T C G G T C A A C G T A G T C A G T C C G T A A C G T A C G T
G A C T G A T C G A T C G A C T G A T C G A T C G A C T A G T C G A T C G A T C G A T C A G T C A G C T A G T C G T A C C G A T A T G C G T A C G A C T A G T C G A T C

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:5
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TCCTVCCCBTGATCCA-
-----CCCCTCCCCCAC
 A C G T A G T C G T A C C G A T T A G C A G T C A G T C G T A C A C T G C G A T A T C G G T C A A C G T A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:6
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TCCTVCCCBTGATCCA
---TGACCTTGACCT-
 A C G T A G T C G T A C C G A T T A G C A G T C A G T C G T A C A C T G C G A T A T C G G T C A A C G T A G T C A G T C C G T A
A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:TCCTVCCCBTGATCCA
---TGACCTTGACCT-
 A C G T A G T C G T A C C G A T T A G C A G T C A G T C G T A C A C T G C G A T A T C G G T C A A C G T A G T C A G T C C G T A
A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:8
Score:0.52
Offset:8
Orientation:forward strand
Alignment:TCCTVCCCBTGATCCA
--------TTAATCCC
 A C G T A G T C G T A C C G A T T A G C A G T C A G T C G T A C A C T G C G A T A T C G G T C A A C G T A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.52
Offset:9
Orientation:forward strand
Alignment:TCCTVCCCBTGATCCA
---------TTTTCCA
 A C G T A G T C G T A C C G A T T A G C A G T C A G T C G T A C A C T G C G A T A T C G G T C A A C G T A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

DMRT3/MA0610.1/Jaspar

Match Rank:10
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:TCCTVCCCBTGATCCA--
-------NTTGATACATT
 A C G T A G T C G T A C C G A T T A G C A G T C A G T C G T A C A C T G C G A T A T C G G T C A A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C T G G C T A A C G T C G T A A G T C C G T A C G A T A C G T