Information for 4-TYTCACCCTGKAM (Motif 6)

A G C T A G T C A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A C G T C G T A G T C A
Reverse Opposite:
A C G T A C G T T G A C A G T C C G T A A C T G A C T G A C T G A C G T A C T G C G T A C T A G C T G A
p-value:1e-7
log p-value:-1.796e+01
Information Content per bp:1.898
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.4 +/- 18.6bp
Average Position of motif in Background53.4 +/- 7.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Spz1/MA0111.1/Jaspar

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TYTCACCCTGKAM
GCTGTTACCCT----
 A C G T A C G T A G C T A G T C A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A C G T C G T A G T C A
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:2
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TYTCACCCTGKAM
NNTTTTCACACCTTNNN-
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A C G T C G T A G T C A
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TYTCACCCTGKAM--
AAATTCCCCCCGGAAGT
 A C G T A C G T A G C T A G T C A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A C G T C G T A G T C A A C G T A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TYTCACCCTGKAM
TTMACACCTT----
 A C G T A G C T A G T C A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A C G T C G T A G T C A
C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T A C G T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TYTCACCCTGKAM
TTTCACACCTN----
 A C G T A C G T A G C T A G T C A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A C G T C G T A G T C A
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TYTCACCCTGKAM
TCACACCT-----
 A G C T A G T C A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A C G T C G T A G T C A
G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TYTCACCCTGKAM
GGCCACACCCA----
 A C G T A C G T A G C T A G T C A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A C G T C G T A G T C A
C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TYTCACCCTGKAM
TTCACACCTT----
 A C G T A G C T A G T C A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A C G T C G T A G T C A
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:9
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TYTCACCCTGKAM
NTTTTCACACCTT----
 A C G T A C G T A C G T A C G T A G C T A G T C A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A C G T C G T A G T C A
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TYTCACCCTGKAM
GGCCACACCCAN---
 A C G T A C G T A G C T A G T C A C G T A G T C C G T A A G T C A G T C A G T C A C G T A C T G A C G T C G T A G T C A
C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T A C G T A C G T