Information for 9-AGTTTACAAT (Motif 20)

C G T A T A C G A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G A C G T C G T A C G T A C G T A A T G C A C G T
p-value:1e-2
log p-value:-6.887e+00
Information Content per bp:1.939
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets54.2 +/- 31.2bp
Average Position of motif in Background59.8 +/- 13.9bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)2.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SRY/MA0084.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AGTTTACAAT
-GTAAACAAT
 C G T A T A C G A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T
A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

PB0132.1_Hbp1_2/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGTTTACAAT-------
NNTNNACAATGGGANNN
 C G T A T A C G A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

HOXD11/MA0908.1/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGTTTACAAT
NTTTTACGAC
 C G T A T A C G A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AGTTTACAAT
---NAACAAT
 C G T A T A C G A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T
A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGTTTACAAT
CBTGTTTAYAWW
 A C G T A C G T C G T A T A C G A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T
A T G C A C G T A C G T C T A G A C G T A C G T A C G T C G T A A G T C G C T A C G A T G C A T

Sox17/MA0078.1/Jaspar

Match Rank:6
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AGTTTACAAT---
----GACAATGNN
 C G T A T A C G A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PB0019.1_Foxl1_1/Jaspar

Match Rank:7
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----AGTTTACAAT--
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A C G T A C G T C G T A T A C G A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C G T A C G T
T G C A A G T C A T G C G C A T C G A T C G A T C T A G A G C T C G A T A C G T C G T A G A T C C G T A G C A T C G A T G C A T G C T A

Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGTTTACAAT
TGTTTACH--
 C G T A T A C G A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T
A C G T A C T G A C G T A C G T A C G T C G T A A G T C G C T A A C G T A C G T

Foxk1/MA0852.1/Jaspar

Match Rank:9
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----AGTTTACAAT--
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A C G T A C G T C G T A T A C G A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:10
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----AGTTTACAAT--
NNNTTTGTTTACATTTN
 A C G T A C G T A C G T A C G T A C G T C G T A T A C G A C G T A C G T A C G T C G T A A G T C C G T A C G T A A C G T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T