Information for 8-GTGCAGTGGA (Motif 19)

A C T G A C G T C T A G A G T C G T C A C T A G A C G T A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C C G T A A G T C A C G T A C T G A G T C C G T A A G T C
p-value:1e-4
log p-value:-1.003e+01
Information Content per bp:1.916
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif2.13%
Number of Background Sequences with motif41.1
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets35.4 +/- 23.1bp
Average Position of motif in Background48.6 +/- 36.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.76
Offset:-4
Orientation:reverse strand
Alignment:----GTGCAGTGGA---
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C T G A C G T C T A G A G T C G T C A C T A G A C G T A C T G A C T G C G T A A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.66
Offset:5
Orientation:reverse strand
Alignment:GTGCAGTGGA-
-----GTGGAT
 A C T G A C G T C T A G A G T C G T C A C T A G A C G T A C T G A C T G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTGCAGTGGA
BTBRAGTGSN
 A C T G A C G T C T A G A G T C G T C A C T A G A C G T A C T G A C T G C G T A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GTGCAGTGGA----
----AATGGAAAAT
 A C T G A C G T C T A G A G T C G T C A C T A G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GTGCAGTGGA
GAACAATGGN
 A C T G A C G T C T A G A G T C G T C A C T A G A C G T A C T G A C T G C G T A
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTGCAGTGGA
VRAACAATGG-
 A C G T A C T G A C G T C T A G A G T C G T C A C T A G A C G T A C T G A C T G C G T A
T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G A C G T

SOX9/MA0077.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GTGCAGTGGA
GAACAATGG-
 A C T G A C G T C T A G A G T C G T C A C T A G A C G T A C T G A C T G C G T A
C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GTGCAGTGGA----
----NNTGGAAANN
 A C T G A C G T C T A G A G T C G T C A C T A G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTGCAGTGGA----
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C T G A C G T C T A G A G T C G T C A C T A G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTGCAGTGGA---
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T A C T G A C G T C T A G A G T C G T C A C T A G A C G T A C T G A C T G C G T A A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A