Information for 10-AKTCTKCATKCTC (Motif 16)

C G T A A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G T G A C C G T A A C G T A C T G T G A C C G T A A C T G C G T A G T C A A C G T
p-value:1e-4
log p-value:-1.147e+01
Information Content per bp:1.896
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets76.5 +/- 10.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AKTCTKCATKCTC
GAATATTCAT----
 A C G T C G T A A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A G T C
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T A C G T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---AKTCTKCATKCTC
TGAATTATGCAT----
 A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A G T C
C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T A C G T A C G T A C G T A C G T

PB0042.1_Mafk_1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AKTCTKCATKCTC-
AAGTCAGCANTTTTN
 A C G T C G T A A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A G T C A C G T
C T G A C G T A T C A G C G A T G T A C C G T A C A T G G T A C C T G A G C A T C G A T G C A T G C A T G C A T G C T A

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-AKTCTKCATKCTC
GHATATKCAT----
 A C G T C G T A A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A G T C
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T A C G T

PB0108.1_Atf1_2/Jaspar

Match Rank:5
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---AKTCTKCATKCTC
NTTATTCGTCATNC--
 A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A G T C
C A T G G C A T G C A T T C G A G A C T C A G T A G T C T A C G G A C T G A T C T C G A A G C T G A C T A T G C A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:6
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AKTCTKCATKCTC
ATTTTCCATT---
 C G T A A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A G T C
C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T A C G T A C G T A C G T

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:7
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AKTCTKCATKCTC
NNAATTAGTCACGGT-
 A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A G T C
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AKTCTKCATKCTC-
TNNATTATGCATANNTT
 A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A G T C A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

MAFK/MA0496.1/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---AKTCTKCATKCTC
CTGAGTCAGCAATTT-
 A C G T A C G T A C G T C G T A A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A G T C
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:AKTCTKCATKCTC
NGTCAGCANTTT-
 C G T A A C G T A C G T A G T C A C G T A C G T A G T C C G T A A C G T A C T G A G T C A C G T A G T C
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T