Information for 4-CCAVCAGTGTGGC (Motif 10)

A G T C A G T C C G T A T A C G A G T C C G T A A T C G A C G T A T C G A C G T A C T G A T C G G T A C
Reverse Opposite:
A C T G A T G C G T A C G T C A A T G C G T C A A T G C C G A T A C T G A G T C A C G T A C T G A C T G
p-value:1e-3
log p-value:-7.443e+00
Information Content per bp:1.755
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif7.14%
Number of Background Sequences with motif174.0
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets59.0 +/- 34.2bp
Average Position of motif in Background46.9 +/- 30.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCAVCAGTGTGGC
CCAGCTGTTN---
 A G T C A G T C C G T A T A C G A G T C C G T A A T C G A C G T A T C G A C G T A C T G A T C G G T A C
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T A C G T A C G T

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCAVCAGTGTGGC
NNVCAGCTGB-----
 A C G T A C G T A G T C A G T C C G T A T A C G A G T C C G T A A T C G A C G T A T C G A C G T A C T G A T C G G T A C
C A T G T C A G T G A C G T A C G T C A T A C G T A G C G C A T T A C G A C T G A C G T A C G T A C G T A C G T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCAVCAGTGTGGC
GCCATCTGTT----
 A C G T A G T C A G T C C G T A T A C G A G T C C G T A A T C G A C G T A T C G A C G T A C T G A T C G G T A C
T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CCAVCAGTGTGGC
DCHCAGCAGGRGGCC
 A C G T A C G T A G T C A G T C C G T A T A C G A G T C C G T A A T C G A C G T A T C G A C G T A C T G A T C G G T A C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CCAVCAGTGTGGC
NVCAGCTGBBNN--
 A C G T A G T C A G T C C G T A T A C G A G T C C G T A A T C G A C G T A T C G A C G T A C T G A T C G G T A C
T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCAVCAGTGTGGC
ACCACCTGTT----
 A C G T A G T C A G T C C G T A T A C G A G T C C G T A A T C G A C G T A T C G A C G T A C T G A T C G G T A C
G C T A G T A C A G T C G T C A A T G C T A G C C G A T C A T G A C G T C G A T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCAVCAGTGTGGC
NNGCAGCTGTC----
 A C G T A C G T A G T C A G T C C G T A T A C G A G T C C G T A A T C G A C G T A T C G A C G T A C T G A T C G G T A C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCAVCAGTGTGGC------
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A G T C C G T A T A C G A G T C C G T A A T C G A C G T A T C G A C G T A C T G A T C G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCAVCAGTGTGGC
NNGCAGCTGTT----
 A C G T A C G T A G T C A G T C C G T A T A C G A G T C C G T A A T C G A C G T A T C G A C G T A C T G A T C G G T A C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCAVCAGTGTGGC
CACAGCAGGGGG--
 A C G T A G T C A G T C C G T A T A C G A G T C C G T A A T C G A C G T A T C G A C G T A C T G A T C G G T A C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T