Information for 12-TAGCAAAGAC (Motif 16)

A C G T C G T A A T C G A G T C C G T A G T C A C G T A A C T G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A C G T A C G T A C G T A C T G A T G C A C G T C G T A
p-value:1e-8
log p-value:-1.872e+01
Information Content per bp:1.937
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif7.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets64.3 +/- 29.1bp
Average Position of motif in Background45.5 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TAGCAAAGAC
CCGCATAGCAACGGA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G A G T C C G T A G T C A C G T A A C T G C G T A A G T C
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

PB0071.1_Sox4_1/Jaspar

Match Rank:2
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TAGCAAAGAC---
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T C G T A A T C G A G T C C G T A G T C A C G T A A C T G C G T A A G T C A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0119.1_Foxa2_2/Jaspar

Match Rank:3
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TAGCAAAGAC
AAAAATAACAAACGG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G A G T C C G T A G T C A C G T A A C T G C G T A A G T C
T C G A T C G A C G T A C G T A G T C A A C G T C T G A C G T A G A T C G T C A G C T A C T G A T A G C T A C G A T C G

PB0055.1_Rfx4_1/Jaspar

Match Rank:4
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TAGCAAAGAC
TACCATAGCAACGGT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G A G T C C G T A G T C A C G T A A C T G C G T A A G T C
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TAGCAAAGAC---
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C G T C G T A A T C G A G T C C G T A G T C A C G T A A C T G C G T A A G T C A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TAGCAAAGAC----
AGCGGCACACACGCAA
 A C G T A C G T A C G T C G T A A T C G A G T C C G T A G T C A C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TAGCAAAGAC
GGAACAAAGR-
 A C G T A C G T C G T A A T C G A G T C C G T A G T C A C G T A A C T G C G T A A G T C
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:8
Score:0.56
Offset:-9
Orientation:forward strand
Alignment:---------TAGCAAAGAC----
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A T C G A G T C C G T A G T C A C G T A A C T G C G T A A G T C A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:9
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TAGCAAAGAC---
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T A C G T C G T A A T C G A G T C C G T A G T C A C G T A A C T G C G T A A G T C A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TAGCAAAGAC-
ACATCAAAGGNA
 A C G T A C G T C G T A A T C G A G T C C G T A G T C A C G T A A C T G C G T A A G T C A C G T
C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A