Information for 7-AGCCGGCATT (Motif 11)

C G T A A C T G G T A C G T A C A T C G A C T G A T G C G T C A A C G T A C G T
Reverse Opposite:
G T C A C G T A C A G T A T C G A G T C T A G C A C T G A C T G A G T C A C G T
p-value:1e-9
log p-value:-2.249e+01
Information Content per bp:1.869
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif36.0
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets51.3 +/- 24.8bp
Average Position of motif in Background51.4 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGCCGGCATT-
GTCCGCCATTA
 C G T A A C T G G T A C G T A C A T C G A C T G A T G C G T C A A C G T A C G T A C G T
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AGCCGGCATT---
TCGTACCCGCATCATT
 A C G T A C G T A C G T C G T A A C T G G T A C G T A C A T C G A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T

GCM2/MA0767.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGCCGGCATT
TACCCGCATN
 C G T A A C T G G T A C G T A C A T C G A C T G A T G C G T C A A C G T A C G T
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A

Hic1/MA0739.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGCCGGCATT
GGTTGGCAT-
 C G T A A C T G G T A C G T A C A T C G A C T G A T G C G T C A A C G T A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AGCCGGCATT
CAGCC------
 A C G T C G T A A C T G G T A C G T A C A T C G A C T G A T G C G T C A A C G T A C G T
T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGCCGGCATT---
-GCCGCCATCTTG
 C G T A A C T G G T A C G T A C A T C G A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGCCGGCATT
NGTGGGCAT-
 C G T A A C T G G T A C G T A C A T C G A C T G A T G C G T C A A C G T A C G T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

ELF3/MA0640.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGCCGGCATT--
AACCCGGAAGTAA
 A C G T C G T A A C T G G T A C G T A C A T C G A C T G A T G C G T C A A C G T A C G T A C G T A C G T
G C T A G C T A T A G C T A G C T G A C C T A G A C T G T C G A G C T A C T A G G A C T C T G A C T G A

EHF/MA0598.2/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AGCCGGCATT-
AACCCGGAAGTA
 A C G T C G T A A C T G G T A C G T A C A T C G A C T G A T G C G T C A A C G T A C G T A C G T
G C T A G C T A T A G C T A G C T G A C T C A G A C T G G T C A T G C A T C A G G A C T C T G A

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AGCCGGCATT-
---NGGGATTA
 C G T A A C T G G T A C G T A C A T C G A C T G A T G C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A