Information for 6-CACAGACACTGTCCAC (Motif 17)

A G T C C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C A G T C C G T A A G T C
Reverse Opposite:
A C T G A C G T A C T G A C T G C G T A A G T C C G T A A C T G A C G T A C T G A C G T A G T C A C G T A C T G A C G T A C T G
p-value:1e-2
log p-value:-5.881e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets8.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0177.1_Sox7_2/Jaspar

Match Rank:1
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------CACAGACACTGTCCAC
NNCNNNCNCANACAATTAGNAC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C A G T C C G T A A G T C
T C G A A T C G T G A C C A T G A G C T G T C A A G T C C G T A A T G C C T G A A T G C C G T A A G T C C G T A C G T A G C A T C A G T G C T A T A C G A T G C G C T A T G A C

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.53
Offset:10
Orientation:forward strand
Alignment:CACAGACACTGTCCAC
----------ATCCAC
 A G T C C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CACAGACACTGTCCAC
-CCAGACRSVB-----
 A G T C C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C A G T C C G T A A G T C
A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:4
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CACAGACACTGTCCAC--
--CAATCACTGGCAGAAT
 A G T C C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CACAGACACTGTCCAC
-CCAGACAG-------
 A G T C C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C A G T C C G T A A G T C
A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CACAGACACTGTCCAC
-BCAGACWA-------
 A G T C C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C A G T C C G T A A G T C
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:7
Score:0.48
Offset:2
Orientation:forward strand
Alignment:CACAGACACTGTCCAC--
--GAGCCCTTGTCCCTAA
 A G T C C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.48
Offset:-4
Orientation:forward strand
Alignment:----CACAGACACTGTCCAC
CAAATCCAGACATCACA---
 A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C A G T C C G T A A G T C
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.48
Offset:7
Orientation:forward strand
Alignment:CACAGACACTGTCCAC-
-------ATTTTCCATT
 A G T C C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:CACAGACACTGTCCAC
CACAGN----------
 A G T C C G T A A G T C C G T A A C T G C G T A A G T C C G T A A G T C A C G T A C T G A C G T A G T C A G T C C G T A A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T