Information for 1-TGTCCNTTTCMRA (Motif 2)

A G C T C A T G C G A T A T G C G A T C A C G T A C G T C A G T A G C T A T G C G T A C T C A G C T G A
Reverse Opposite:
G A C T A G T C A C T G A T C G C T G A G C T A C G T A G T C A C T A G T A C G G C T A G T A C C T G A
p-value:1e-7
log p-value:-1.695e+01
Information Content per bp:1.632
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif4.88%
Number of Background Sequences with motif73.2
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets54.5 +/- 25.2bp
Average Position of motif in Background51.0 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGTCCNTTTCMRA
AGTTTCAGTTTC---
 A C G T A C G T A G C T C A T G C G A T A T G C G A T C A C G T A C G T C A G T A G C T A T G C G T A C T C A G C T G A
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGTCCNTTTCMRA
ACTTTCACTTTC---
 A C G T A C G T A G C T C A T G C G A T A T G C G A T C A C G T A C G T C A G T A G C T A T G C G T A C T C A G C T G A
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T A C G T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGTCCNTTTCMRA
AGTTTCAKTTTC---
 A C G T A C G T A G C T C A T G C G A T A T G C G A T C A C G T A C G T C A G T A G C T A T G C G T A C T C A G C T G A
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C A C G T A C G T A C G T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TGTCCNTTTCMRA
TCAGTTTCATTTTCC--
 A C G T A C G T A C G T A C G T A G C T C A T G C G A T A T G C G A T C A C G T A C G T C A G T A G C T A T G C G T A C T C A G C T G A
C A G T G A T C C T G A T A C G A G C T G C A T A G C T A G T C C T G A A C G T A G C T G C A T A G C T G A T C A G T C A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGTCCNTTTCMRA
RSTTTCRSTTTC---
 A C G T A C G T A G C T C A T G C G A T A T G C G A T C A C G T A C G T C A G T A G C T A T G C G T A C T C A G C T G A
T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C A C G T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGTCCNTTTCMRA
ASTTTCASTTYC---
 A C G T A C G T A G C T C A T G C G A T A T G C G A T C A C G T A C G T C A G T A G C T A T G C G T A C T C A G C T G A
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T A C G T A C G T

IRF7/MA0772.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGTCCNTTTCMRA
ANTTTCGCTTTCGN-
 A C G T A C G T A G C T C A T G C G A T A T G C G A T C A C G T A C G T C A G T A G C T A T G C G T A C T C A G C T G A
C G T A A G T C C G A T A C G T C A G T G A T C C T A G A G T C A C G T C G A T A C G T T G A C A C T G C A G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:8
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------TGTCCNTTTCMRA
GTTTTGCTTTCACTTTCC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C A T G C G A T A T G C G A T C A C G T A C G T C A G T A G C T A T G C G T A C T C A G C T G A
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TGTCCNTTTCMRA
TGACCTTTNCNT-
 A G C T C A T G C G A T A T G C G A T C A C G T A C G T C A G T A G C T A T G C G T A C T C A G C T G A
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TGTCCNTTTCMRA
AGTTTCGGTTTCGN-
 A C G T A C G T A G C T C A T G C G A T A T G C G A T C A C G T A C G T C A G T A G C T A T G C G T A C T C A G C T G A
C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A A C G T