Information for 1-ACYARWTAAAACTGAY (Motif 1)

T C G A G T A C A G T C C T G A T C A G G C A T A G C T G T C A G T C A C G T A T G C A G T A C A G C T A T C G T C G A G A C T
Reverse Opposite:
C T A G A G C T A T G C C T G A C A T G A C G T G C A T C A G T C A G T T C G A C G T A A G T C G A C T C T A G A C T G A G C T
p-value:1e-13
log p-value:-3.117e+01
Information Content per bp:1.580
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif9.76%
Number of Background Sequences with motif167.2
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets48.5 +/- 24.5bp
Average Position of motif in Background47.8 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ACYARWTAAAACTGAY---
AACCGGTTNNAACCGGTTTN
 A C G T T C G A G T A C A G T C C T G A T C A G G C A T A G C T G T C A G T C A C G T A T G C A G T A C A G C T A T C G T C G A G A C T A C G T A C G T A C G T
C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T C T A G C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T A G C T A C T G

LBX1/MA0618.1/Jaspar

Match Rank:2
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ACYARWTAAAACTGAY
-CTAATTAA-------
 T C G A G T A C A G T C C T G A T C A G G C A T A G C T G T C A G T C A C G T A T G C A G T A C A G C T A T C G T C G A G A C T
A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0108.1_Msx3/Jaspar

Match Rank:3
Score:0.52
Offset:-4
Orientation:forward strand
Alignment:----ACYARWTAAAACTGAY
CAAAACCAATTAATTT----
 A C G T A C G T A C G T A C G T T C G A G T A C A G T C C T G A T C A G G C A T A G C T G T C A G T C A C G T A T G C A G T A C A G C T A T C G T C G A G A C T
T G A C T C G A G T C A C T G A T C G A A T G C A G T C C T G A G T C A C G A T G A C T C G T A C T G A A C G T G A C T G C A T A C G T A C G T A C G T A C G T

PH0107.1_Msx2/Jaspar

Match Rank:4
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----ACYARWTAAAACTGAY
GAAGACCAATTAGCGCT---
 A C G T A C G T A C G T A C G T T C G A G T A C A G T C C T G A T C A G G C A T A G C T G T C A G T C A C G T A T G C A G T A C A G C T A T C G T C G A G A C T
T C A G T G C A C T G A T A C G C T G A A T G C G A T C C G T A G T C A C G A T G A C T C T G A C A T G G A T C C A T G G A T C A G C T A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:5
Score:0.51
Offset:7
Orientation:forward strand
Alignment:ACYARWTAAAACTGAY-
-------NHAACBGYYV
 T C G A G T A C A G T C C T G A T C A G G C A T A G C T G T C A G T C A C G T A T G C A G T A C A G C T A T C G T C G A G A C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A

PH0175.1_Vax2/Jaspar

Match Rank:6
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----ACYARWTAAAACTGAY
GTGCACTAATTAAGAC----
 A C G T A C G T A C G T A C G T T C G A G T A C A G T C C T G A T C A G G C A T A G C T G T C A G T C A C G T A T G C A G T A C A G C T A T C G T C G A G A C T
A C T G C G A T T A C G A T G C T C G A A G T C G A C T G T C A C G T A C G A T A C G T C G T A T C G A A C T G T C G A T A G C A C G T A C G T A C G T A C G T

PH0005.1_Barhl1/Jaspar

Match Rank:7
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----ACYARWTAAAACTGAY
AACAACCAATTAATTC----
 A C G T A C G T A C G T A C G T T C G A G T A C A G T C C T G A T C A G G C A T A G C T G T C A G T C A C G T A T G C A G T A C A G C T A T C G T C G A G A C T
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C A C G T A C G T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:8
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----ACYARWTAAAACTGAY
AAAAACCAATTAAGAA----
 A C G T A C G T A C G T A C G T T C G A G T A C A G T C C T G A T C A G G C A T A G C T G T C A G T C A C G T A T G C A G T A C A G C T A T C G T C G A G A C T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A A C G T A C G T A C G T A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--ACYARWTAAAACTGAY
AACCCAATAAAATTCG--
 A C G T A C G T T C G A G T A C A G T C C T G A T C A G G C A T A G C T G T C A G T C A C G T A T G C A G T A C A G C T A T C G T C G A G A C T
T G C A C T G A G T A C A G T C G A T C G C T A C T G A A G C T C G T A C G T A G C T A T G C A G C A T G C A T G A T C T A C G A C G T A C G T

PH0040.1_Hmbox1/Jaspar

Match Rank:10
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----ACYARWTAAAACTGAY
GAAAACTAGTTAACATC---
 A C G T A C G T A C G T A C G T T C G A G T A C A G T C C T G A T C A G G C A T A G C T G T C A G T C A C G T A T G C A G T A C A G C T A T C G T C G A G A C T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C A C G T A C G T A C G T