Information for 18-CCTCAACGCC (Motif 42)

A G T C A G T C A C G T A G T C C G T A C G T A A G T C A C T G A G T C A G T C
Reverse Opposite:
A C T G A C T G A G T C A C T G A C G T A C G T A C T G C G T A A C T G A C T G
p-value:1e-3
log p-value:-8.170e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets47.0 +/- 0.0bp
Average Position of motif in Background41.9 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCTCAACGCC-
-NTCAAGGTCA
 A G T C A G T C A C G T A G T C C G T A C G T A A G T C A C T G A G T C A G T C A C G T
A C G T A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CCTCAACGCC-
-BTCAAGGTCA
 A G T C A G T C A C G T A G T C C G T A C G T A A G T C A C T G A G T C A G T C A C G T
A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCTCAACGCC---
AAGTTCAAGGTCAGC
 A C G T A C G T A G T C A G T C A C G T A G T C C G T A C G T A A G T C A C T G A G T C A G T C A C G T A C G T A C G T
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

SP3/MA0746.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCTCAACGCC---
--GCCACGCCCCC
 A G T C A G T C A C G T A G T C C G T A C G T A A G T C A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T T A C G G T A C G T A C T G C A G A T C C T A G G T A C G T A C A G T C G T A C G A T C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CCTCAACGCC
ACATCAAAGG-
 A C G T A G T C A G T C A C G T A G T C C G T A C G T A A G T C A C T G A G T C A G T C
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CCTCAACGCC---
---CAAGGHCANV
 A G T C A G T C A C G T A G T C C G T A C G T A A G T C A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G

BARHL2/MA0635.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CCTCAACGCC
GCTAAACGGT
 A G T C A G T C A C G T A G T C C G T A C G T A A G T C A C T G A G T C A G T C
T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

ESRRB/MA0141.3/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CCTCAACGCC---
--TCAAGGTCATA
 A G T C A G T C A C G T A G T C C G T A C G T A A G T C A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A

SP8/MA0747.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CCTCAACGCC----
--GCCACGCCCACT
 A G T C A G T C A C G T A G T C C G T A C G T A A G T C A C T G A G T C A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CCTCAACGCC
ACWTCAAAGG-
 A C G T A G T C A G T C A C G T A G T C C G T A C G T A A G T C A C T G A G T C A G T C
C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G A C G T