Information for 3-CGCGGACAGAAACDAG (Motif 4)

A G T C A C T G G T A C A C T G C T A G C T G A A T G C C G T A A T C G G T C A C G T A G T C A G T A C C A G T C T G A A C T G
Reverse Opposite:
A G T C A G C T G A C T A C T G A C G T A C G T A C G T A T G C A C G T A T C G A G C T A G T C G T A C A C T G G T A C C T A G
p-value:1e-8
log p-value:-1.936e+01
Information Content per bp:1.719
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif37.50%
Number of Background Sequences with motif35.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets75.0 +/- 3.6bp
Average Position of motif in Background54.5 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CGCGGACAGAAACDAG--
---TGACANARRCCAGRC
 A G T C A C T G G T A C A C T G C T A G C T G A A T G C C G T A A T C G G T C A C G T A G T C A G T A C C A G T C T G A A C T G A C G T A C G T
A C G T A C G T A C G T C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

PB0166.1_Sox12_2/Jaspar

Match Rank:2
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CGCGGACAGAAACDAG-
-AAACAGACAAAGGAAT
 A G T C A C T G G T A C A C T G C T A G C T G A A T G C C G T A A T C G G T C A C G T A G T C A G T A C C A G T C T G A A C T G A C G T
A C G T T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.49
Offset:2
Orientation:forward strand
Alignment:CGCGGACAGAAACDAG-
--CTCACACAATGGCGC
 A G T C A C T G G T A C A C T G C T A G C T G A A T G C C G T A A T C G G T C A C G T A G T C A G T A C C A G T C T G A A C T G A C G T
A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:4
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--CGCGGACAGAAACDAG
GGTGYTGACAGS------
 A C G T A C G T A G T C A C T G G T A C A C T G C T A G C T G A A T G C C G T A A T C G G T C A C G T A G T C A G T A C C A G T C T G A A C T G
T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:CGCGGACAGAAACDAG
----AAAACAAAGG--
 A G T C A C T G G T A C A C T G C T A G C T G A A T G C C G T A A T C G G T C A C G T A G T C A G T A C C A G T C T G A A C T G
A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

PB0033.1_Irf3_1/Jaspar

Match Rank:6
Score:0.47
Offset:1
Orientation:forward strand
Alignment:CGCGGACAGAAACDAG
-GAGAACCGAAACTG-
 A G T C A C T G G T A C A C T G C T A G C T G A A T G C C G T A A T C G G T C A C G T A G T C A G T A C C A G T C T G A A C T G
A C G T A C T G C T G A C T A G C G T A G C T A G T A C T A G C C T A G T C G A G C T A G C T A A T G C G A C T C T A G A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-CGCGGACAGAAACDAG
CCAGGAACAG-------
 A C G T A G T C A C T G G T A C A C T G C T A G C T G A A T G C C G T A A T C G G T C A C G T A G T C A G T A C C A G T C T G A A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.47
Offset:4
Orientation:reverse strand
Alignment:CGCGGACAGAAACDAG
----NACAGGAAAT--
 A G T C A C T G G T A C A C T G C T A G C T G A A T G C C G T A A T C G G T C A C G T A G T C A G T A C C A G T C T G A A C T G
A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

SCRT1/MA0743.1/Jaspar

Match Rank:9
Score:0.46
Offset:6
Orientation:forward strand
Alignment:CGCGGACAGAAACDAG-----
------GAGCAACAGGTGGTT
 A G T C A C T G G T A C A C T G C T A G C T G A A T G C C G T A A T C G G T C A C G T A G T C A G T A C C A G T C T G A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.46
Offset:4
Orientation:forward strand
Alignment:CGCGGACAGAAACDAG
----NACAGGAAAT--
 A G T C A C T G G T A C A C T G C T A G C T G A A T G C C G T A A T C G G T C A C G T A G T C A G T A C C A G T C T G A A C T G
A C G T A C G T A C G T A C G T T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T