Information for 18-CCTTGTTTTGGGT (Motif 33)

A G T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A G T C C G T A C G T A C G T A C G T A A G T C C G T A C G T A A C T G A C T G
p-value:1e-4
log p-value:-9.269e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets88.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGTTTTGGGT--
NNCTTTGTTTTGNTNNN
 A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T A C G T
G C A T A T G C G T A C C G A T G C A T C G A T C T A G C G A T C A G T C G A T A C G T C T A G C A T G G A C T T A C G G C A T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CCTTGTTTTGGGT
CCATTGTTTT----
 A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T A C G T A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCTTGTTTTGGGT
CCTTTGTTTT----
 A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T
A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T

PB0123.1_Foxl1_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGTTTTGGGT-
NNTTTTGTTTTGATNT
 A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T A C G T
C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTGTTTTGGGT
NNNTCCTTTGTTCTNNN-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T
C G A T C G T A T C A G A G C T A G T C G A T C C G A T A C G T C G A T A C T G C G A T A G C T G A T C G C A T G C A T T G C A C G A T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCTTGTTTTGGGT
CCATTGTTYB----
 A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCTTGTTTTGGGT
NCCATTGTTY-----
 A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCTTGTTTTGGGT
CCWTTGTYYB----
 A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----CCTTGTTTTGGGT
TNNTCCTTTGTTCTNNT-
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCTTGTTTTGGGT
CCATTGTTNY----
 A C G T A G T C A G T C A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T