Information for 12-CTCCTCGACCTCA (Motif 29)

A G T C A C G T A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G C G T A A C T G A C T G A C G T A G T C A C T G C G T A A C T G A C T G C G T A A C T G
p-value:1e-4
log p-value:-9.269e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif12.50%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CTCCTCGACCTCA
TGACCTTGACCT--
 A C G T A G T C A C G T A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A G T C C G T A
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CTCCTCGACCTCA
--GCTCGGSCTC-
 A G T C A C G T A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A G T C C G T A
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTCCTCGACCTCA
TGACCTTGACCT--
 A C G T A G T C A C G T A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A G T C C G T A
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CTCCTCGACCTCA
-----TGACCTYA
 A G T C A C G T A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

CREB1/MA0018.2/Jaspar

Match Rank:5
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CTCCTCGACCTCA
-----TGACGTCA
 A G T C A C G T A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T G C A T A C T G C T G A A G T C A T C G A C G T A T G C T C G A

GLI2/MA0734.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CTCCTCGACCTCA---
----GCGACCACACTG
 A G T C A C G T A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:7
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------CTCCTCGACCTCA
NNNTGAACTCNNTGACCTCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A G T C C G T A
G T A C G A T C G T C A G C A T T C A G G T C A G T C A G T A C A G C T A G T C C G T A T A C G G C A T T A C G T G C A G T A C G A T C G A C T A G T C G A C T

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--CTCCTCGACCTCA
GGGGCCGAGGCCTG-
 A C G T A C G T A G T C A C G T A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A G T C C G T A
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:9
Score:0.53
Offset:7
Orientation:reverse strand
Alignment:CTCCTCGACCTCA
-------ACGTCA
 A G T C A C G T A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C T C A G A C G T G T A C C G T A

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CTCCTCGACCTCA----
TGTCGTGACCCCTTAAT
 A G T C A C G T A G T C A G T C A C G T A G T C A C T G C G T A A G T C A G T C A C G T A G T C C G T A A C G T A C G T A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T