Information for 8-HGDTGGAGAAAGGDAC (Motif 11)

G C T A A C T G C A T G C G A T C T A G A T C G C G T A A T C G G T C A C G T A C T G A T C A G A C T G C T A G C G T A T G A C
Reverse Opposite:
A C T G C G A T G A C T T G A C A G T C A G C T C G A T A C G T A T G C A C G T A T G C G A T C C G T A G A T C T G A C C A G T
p-value:1e-5
log p-value:-1.334e+01
Information Content per bp:1.636
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif37.50%
Number of Background Sequences with motif261.9
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets47.0 +/- 17.0bp
Average Position of motif in Background48.7 +/- 36.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:HGDTGGAGAAAGGDAC--
----GGAGAAAGGTGCGA
 G C T A A C T G C A T G C G A T C T A G A T C G C G T A A T C G G T C A C G T A C T G A T C A G A C T G C T A G C G T A T G A C A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:HGDTGGAGAAAGGDAC
---AAAACAAAGG---
 G C T A A C T G C A T G C G A T C T A G A T C G C G T A A T C G G T C A C G T A C T G A T C A G A C T G C T A G C G T A T G A C
A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:HGDTGGAGAAAGGDAC
AAACAGACAAAGGAAT
 G C T A A C T G C A T G C G A T C T A G A T C G C G T A A T C G G T C A C G T A C T G A T C A G A C T G C T A G C G T A T G A C
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0200.1_Zfp187_2/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:HGDTGGAGAAAGGDAC
NNAGGGACAAGGGCNC
 G C T A A C T G C A T G C G A T C T A G A T C G C G T A A T C G G T C A C G T A C T G A T C A G A C T G C T A G C G T A T G A C
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

Gata1/MA0035.3/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:HGDTGGAGAAAGGDAC
----ANAGATAAGAA-
 G C T A A C T G C A T G C G A T C T A G A T C G C G T A A T C G G T C A C G T A C T G A T C A G A C T G C T A G C G T A T G A C
A C G T A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:HGDTGGAGAAAGGDAC
-----AACAAAGG---
 G C T A A C T G C A T G C G A T C T A G A T C G C G T A A T C G G T C A C G T A C T G A T C A G A C T G C T A G C G T A T G A C
A C G T A C G T A C G T A C G T A C G T T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:HGDTGGAGAAAGGDAC
---GGAACAAAGR---
 G C T A A C T G C A T G C G A T C T A G A T C G C G T A A T C G G T C A C G T A C T G A T C A G A C T G C T A G C G T A T G A C
A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:HGDTGGAGAAAGGDAC
-----RACAAWGG---
 G C T A A C T G C A T G C G A T C T A G A T C G C G T A A T C G G T C A C G T A C T G A T C A G A C T G C T A G C G T A T G A C
A C G T A C G T A C G T A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

GATA2/MA0036.2/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:HGDTGGAGAAAGGDAC--
----NCAGATAAGAANNN
 G C T A A C T G C A T G C G A T C T A G A T C G C G T A A T C G G T C A C G T A C T G A T C A G A C T G C T A G C G T A T G A C A C G T A C G T
A C G T A C G T A C G T A C G T C G T A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A C G T A G A C T G A T C G C A T

SOX10/MA0442.1/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:HGDTGGAGAAAGGDAC
------ACAAAG----
 G C T A A C T G C A T G C G A T C T A G A T C G C G T A A T C G G T C A C G T A C T G A T C A G A C T G C T A G C G T A T G A C
A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T