p-value: | 1e-11 |
log p-value: | -2.741e+01 |
Information Content per bp: | 1.665 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 50.00% |
Number of Background Sequences with motif | 31.9 |
Percentage of Background Sequences with motif | 0.04% |
Average Position of motif in Targets | 59.0 +/- 29.8bp |
Average Position of motif in Background | 56.7 +/- 36.6bp |
Strand Bias (log2 ratio + to - strand density) | 1.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer
Match Rank: | 1 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GCTCAGACAGCCTTGT ----AGGVNCCTTTGT |
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PB0200.1_Zfp187_2/Jaspar
Match Rank: | 2 |
Score: | 0.55 |
Offset: | 6 |
Orientation: | forward strand |
Alignment: | GCTCAGACAGCCTTGT------ ------GAGCCCTTGTCCCTAA |
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Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 3 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GCTCAGACAGCCTTGT- --SCAGYCADGCATGAC |
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Myc/MA0147.2/Jaspar
Match Rank: | 4 |
Score: | 0.52 |
Offset: | 10 |
Orientation: | forward strand |
Alignment: | GCTCAGACAGCCTTGT---- ----------CCATGTGCTT |
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NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer
Match Rank: | 5 |
Score: | 0.50 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | GCTCAGACAGCCTTGT--- ---------KCCACGTGAC |
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SOX10/MA0442.1/Jaspar
Match Rank: | 6 |
Score: | 0.50 |
Offset: | 10 |
Orientation: | forward strand |
Alignment: | GCTCAGACAGCCTTGT ----------CTTTGT |
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Mycn/MA0104.3/Jaspar
Match Rank: | 7 |
Score: | 0.49 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | GCTCAGACAGCCTTGT- ---------GCCACGTG |
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USF2/MA0526.1/Jaspar
Match Rank: | 8 |
Score: | 0.49 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | GCTCAGACAGCCTTGT---- ---------GTCATGTGACC |
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MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer
Match Rank: | 9 |
Score: | 0.49 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | GCTCAGACAGCCTTGT--- ---------RTCATGTGAC |
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c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer
Match Rank: | 10 |
Score: | 0.49 |
Offset: | 9 |
Orientation: | forward strand |
Alignment: | GCTCAGACAGCCTTGT- ---------NCCACGTG |
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