Information for 3-GGCCAGAAAAATC (Motif 7)

A C T G A C T G T G A C G T A C C G T A T A C G G T C A C G T A T G C A G C T A C G T A C G A T A G T C
Reverse Opposite:
C T A G C G T A G C A T C G A T A C G T G A C T C A G T A T G C A C G T A C T G A C T G G T A C G T A C
p-value:1e-11
log p-value:-2.558e+01
Information Content per bp:1.695
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif95.8
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets49.2 +/- 23.7bp
Average Position of motif in Background47.7 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)2.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GGCCAGAAAAATC
ATGCCAGACN----
 A C G T A C T G A C T G T G A C G T A C C G T A T A C G G T C A C G T A T G C A G C T A C G T A C G A T A G T C
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GGCCAGAAAAATC
AAAGGTAATAAAATTT
 A C G T A C G T A C G T A C T G A C T G T G A C G T A C C G T A T A C G G T C A C G T A T G C A G C T A C G T A C G A T A G T C
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T

PH0064.1_Hoxb9/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGCCAGAAAAATC-
AGAGCCATAAAATTCG
 A C G T A C G T A C T G A C T G T G A C G T A C C G T A T A C G G T C A C G T A T G C A G C T A C G T A C G A T A G T C A C G T
T C A G T C A G T C G A A T C G G A T C G T A C C T G A G A C T C G T A C G T A C G T A C G T A G C A T G A C T G T A C C T A G

PH0056.1_Hoxa9/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGCCAGAAAAATC--
ACGGCCATAAAATTAAT
 A C G T A C G T A C T G A C T G T G A C G T A C C G T A T A C G G T C A C G T A T G C A G C T A C G T A C G A T A G T C A C G T A C G T
C T G A T G A C C T A G A T C G G A T C G T A C C T G A C G A T G C T A C G T A C G T A C G T A G C A T C A G T C G T A C T G A C G A T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGCCAGAAAAATC
TGCCAA-------
 A C T G A C T G T G A C G T A C C G T A T A C G G T C A C G T A T G C A G C T A C G T A C G A T A G T C
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGCCAGAAAAATC
CGTGCCAAG------
 A C G T A C G T A C T G A C T G T G A C G T A C C G T A T A C G G T C A C G T A T G C A G C T A C G T A C G A T A G T C
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGCCAGAAAAATC
AAGCCATAAAA---
 A C G T A C T G A C T G T G A C G T A C C G T A T A C G G T C A C G T A T G C A G C T A C G T A C G A T A G T C
T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A A C G T A C G T A C G T

HSF4/MA0771.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGCCAGAAAAATC
TTCTAGAACGTTC
 A C T G A C T G T G A C G T A C C G T A T A C G G T C A C G T A T G C A G C T A C G T A C G A T A G T C
C G A T C A G T T A G C A G C T T C G A A T C G G C T A G C T A A G T C T C A G C G A T C G A T A G T C

HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GGCCAGAAAAATC--
TTCTAGAABNTTCTA
 A C T G A C T G T G A C G T A C C G T A T A C G G T C A C G T A T G C A G C T A C G T A C G A T A G T C A C G T A C G T
G A C T A G C T G T A C G A C T C T G A A C T G G T C A C T G A A T G C T A C G G A C T A C G T A G T C G A C T C T G A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GGCCAGAAAAATC---
TGCCAAAATAAACANN
 A C T G A C T G T G A C G T A C C G T A T A C G G T C A C G T A T G C A G C T A C G T A C G A T A G T C A C G T A C G T A C G T
C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A