Information for 2-CACCAGCCCACCC (Motif 6)

A G T C G C T A A G T C G T A C C G T A A C T G A G T C G T A C A G T C C G T A G T A C A G T C G T A C
Reverse Opposite:
A C T G A C T G A C T G C G A T A C T G A C T G A C T G A G T C C G A T A C T G A C T G C A G T A C T G
p-value:1e-11
log p-value:-2.608e+01
Information Content per bp:1.860
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif11.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets58.9 +/- 28.5bp
Average Position of motif in Background43.8 +/- 22.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CACCAGCCCACCC
SNGCACCTGCHS----
 A C G T A C G T A C G T A G T C G C T A A G T C G T A C C G T A A C T G A G T C G T A C A G T C C G T A G T A C A G T C G T A C
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C A C G T A C G T A C G T A C G T

PB0167.1_Sox13_2/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CACCAGCCCACCC-----
-ANNTNCCCACCCANNAC
 A G T C G C T A A G T C G T A C C G T A A C T G A G T C G T A C A G T C C G T A G T A C A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T G T C A C G T A C G A T C G A T C G T A G T A C G T A C T A G C C G T A G A T C G T A C G T A C C T G A C T G A G A C T G C T A G A T C

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CACCAGCCCACCC
NNCACCTGNN-----
 A C G T A C G T A G T C G C T A A G T C G T A C C G T A A C T G A G T C G T A C A G T C C G T A G T A C A G T C G T A C
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CACCAGCCCACCC
TACACCTGTC-----
 A C G T A C G T A G T C G C T A A G T C G T A C C G T A A C T G A G T C G T A C A G T C C G T A G T A C A G T C G T A C
C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C A C G T A C G T A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CACCAGCCCACCC
NCACCTGTN-----
 A C G T A G T C G C T A A G T C G T A C C G T A A C T G A G T C G T A C A G T C C G T A G T A C A G T C G T A C
T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T A C G T A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CACCAGCCCACCC
CGCACCTGCT-----
 A C G T A C G T A G T C G C T A A G T C G T A C C G T A A C T G A G T C G T A C A G T C C G T A G T A C A G T C G T A C
G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CACCAGCCCACCC
AACACCTGCT-----
 A C G T A C G T A G T C G C T A A G T C G T A C C G T A A C T G A G T C G T A C A G T C C G T A G T A C A G T C G T A C
G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CACCAGCCCACCC----
-AGCGGCACACACGCAA
 A G T C G C T A A G T C G T A C C G T A A C T G A G T C G T A C A G T C C G T A G T A C A G T C G T A C A C G T A C G T A C G T A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

EGR4/MA0733.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CACCAGCCCACCC----
-TTACGCCCACGCATTT
 A G T C G C T A A G T C G T A C C G T A A C T G A G T C G T A C A G T C C G T A G T A C A G T C G T A C A C G T A C G T A C G T A C G T
A C G T G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CACCAGCCCACCC-
---GGCCACACCCA
 A G T C G C T A A G T C G T A C C G T A A C T G A G T C G T A C A G T C C G T A G T A C A G T C G T A C A C G T
A C G T A C G T A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A