Information for 10-CTTGCTGAGGTGAGAA (Motif 20)

A G T C A C G T A C G T A T C G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A C T G C G T A A C T G C G T A C T G A
Reverse Opposite:
A G C T A C G T A G T C A C G T G T A C C G T A A G T C A G T C A C G T A G T C C G T A T A C G A T G C C G T A C G T A A C T G
p-value:1e-6
log p-value:-1.474e+01
Information Content per bp:1.933
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.7 +/- 10.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TBR1/MA0802.1/Jaspar

Match Rank:1
Score:0.62
Offset:7
Orientation:forward strand
Alignment:CTTGCTGAGGTGAGAA-
-------AGGTGTGAAA
 A G T C A C G T A C G T A T C G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A C T G C G T A A C T G C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:2
Score:0.62
Offset:7
Orientation:reverse strand
Alignment:CTTGCTGAGGTGAGAA-
-------AGGTGTTAAT
 A G T C A C G T A C G T A T C G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A C T G C G T A A C T G C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T

TBX21/MA0690.1/Jaspar

Match Rank:3
Score:0.62
Offset:6
Orientation:forward strand
Alignment:CTTGCTGAGGTGAGAA
------AAGGTGTGAA
 A G T C A C G T A C G T A T C G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A C T G C G T A A C T G C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

EOMES/MA0800.1/Jaspar

Match Rank:4
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CTTGCTGAGGTGAGAA---
------AAGGTGTGAAAAT
 A G T C A C G T A C G T A T C G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A C T G C G T A A C T G C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.61
Offset:7
Orientation:forward strand
Alignment:CTTGCTGAGGTGAGAA-
-------AGGTGTGAAM
 A G T C A C G T A C G T A T C G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A C T G C G T A A C T G C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

TBX15/MA0803.1/Jaspar

Match Rank:6
Score:0.60
Offset:7
Orientation:forward strand
Alignment:CTTGCTGAGGTGAGAA
-------AGGTGTGA-
 A G T C A C G T A C G T A T C G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A C T G C G T A A C T G C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CTTGCTGAGGTGAGAA----
---GAAAAGGTGTGAAAATT
 A G T C A C G T A C G T A T C G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A C T G C G T A A C T G C G T A C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A G C T A C T G A C T G A C T A G A C T G A G C T C T A G G A C T A C T G C T G A G T C A G T C A G C T A G A C T G A C T

TBX20/MA0689.1/Jaspar

Match Rank:8
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CTTGCTGAGGTGAGAA-
------TAGGTGTGAAG
 A G T C A C G T A C G T A T C G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A C T G C G T A A C T G C G T A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.59
Offset:7
Orientation:forward strand
Alignment:CTTGCTGAGGTGAGAA
-------AGGTGTGA-
 A G T C A C G T A C G T A T C G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A C T G C G T A A C T G C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTTGCTGAGGTGAGAA
----GTGGGGTGAT--
 A G T C A C G T A C G T A T C G A G T C A C G T A C T G C G T A A C T G A C T G A C G T A C T G C G T A A C T G C G T A C T G A
A C G T A C G T A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T A C G T A C G T