Information for 1-TTCAGGGTAACAA (Motif 2)

A C G T A C G T A G T C C G T A A C T G C T A G C A T G C A G T C T G A C T G A A G T C G T C A C T G A
Reverse Opposite:
A G C T A C G T A C T G A G C T A G C T G T C A G T A C G A T C T G A C A C G T A C T G C G T A C G T A
p-value:1e-12
log p-value:-2.907e+01
Information Content per bp:1.770
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.50%
Number of Background Sequences with motif19.3
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets46.8 +/- 30.4bp
Average Position of motif in Background62.6 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Spz1/MA0111.1/Jaspar

Match Rank:1
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TTCAGGGTAACAA-
---AGGGTAACAGC
 A C G T A C G T A G T C C G T A A C T G C T A G C A T G C A G T C T G A C T G A A G T C G T C A C T G A A C G T
A C G T A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:TTCAGGGTAACAA-
--------AACAAT
 A C G T A C G T A G T C C G T A A C T G C T A G C A T G C A G T C T G A C T G A A G T C G T C A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G T A G A T C C T G A T G C A C G A T

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.59
Offset:5
Orientation:forward strand
Alignment:TTCAGGGTAACAA-
-----GTAAACAAT
 A C G T A C G T A G T C C G T A A C T G C T A G C A T G C A G T C T G A C T G A A G T C G T C A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TTCAGGGTAACAA---
------RNAACAATGG
 A C G T A C G T A G T C C G T A A C T G C T A G C A T G C A G T C T G A C T G A A G T C G T C A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TTCAGGGTAACAA
-SCCTAGCAACAG
 A C G T A C G T A G T C C G T A A C T G C T A G C A T G C A G T C T G A C T G A A G T C G T C A C T G A
A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:TTCAGGGTAACAA-
-------NAACAAT
 A C G T A C G T A G T C C G T A A C T G C T A G C A T G C A G T C T G A C T G A A G T C G T C A C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTCAGGGTAACAA
GHWACAWTGTWDCWA
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C T A G C A T G C A G T C T G A C T G A A G T C G T C A C T G A
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTCAGGGTAACAA
GHTACAWTGTADCHR
 A C G T A C G T A C G T A C G T A G T C C G T A A C T G C T A G C A T G C A G T C T G A C T G A A G T C G T C A C T G A
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TTCAGGGTAACAA-------
---AGAAGAACAAAGGACTA
 A C G T A C G T A G T C C G T A A C T G C T A G C A T G C A G T C T G A C T G A A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PH0166.1_Six6_2/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:TTCAGGGTAACAA----
AATAGGGTATCAATATT
 A C G T A C G T A G T C C G T A A C T G C T A G C A T G C A G T C T G A C T G A A G T C G T C A C T G A A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T