Information for 9-TATTATAAGTTATART (Motif 19)

A C G T C T G A A C G T C G A T C G T A A C G T C G T A C G T A T A C G A C G T A G C T C G T A A C G T C G T A T C A G A C G T
Reverse Opposite:
G T C A A G T C C G A T C G T A A C G T C T G A C G T A A T G C C G A T A C G T C G T A A C G T C G T A T C G A A G C T G T C A
p-value:1e-6
log p-value:-1.474e+01
Information Content per bp:1.810
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.8 +/- 21.0bp
Average Position of motif in Background38.3 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0069.1_Sox21_1/Jaspar

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TATTATAAGTTATART----
----NNTAATTATAATNANN
 A C G T C T G A A C G T C G A T C G T A A C G T C G T A C G T A T A C G A C G T A G C T C G T A A C G T C G T A T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

PB0079.1_Sry_1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TATTATAAGTTATART----
----TATAATTATAATATTC
 A C G T C T G A A C G T C G A T C G T A A C G T C G T A C G T A T A C G A C G T A G C T C G T A A C G T C G T A T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0064.1_Sox14_1/Jaspar

Match Rank:3
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TATTATAAGTTATART----
----GCTAATTATAATTATC
 A C G T C T G A A C G T C G A T C G T A A C G T C G T A C G T A T A C G A C G T A G C T C G T A A C G T C G T A T C A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0187.1_Tcf7_2/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TATTATAAGTTATART
CCGTATTATAAACAA----
 A C G T A C G T A C G T A C G T C T G A A C G T C G A T C G T A A C G T C G T A C G T A T A C G A C G T A G C T C G T A A C G T C G T A T C A G A C G T
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A A C G T A C G T A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TATTATAAGTTATART
----ATGAGTCAT---
 A C G T C T G A A C G T C G A T C G T A A C G T C G T A C G T A T A C G A C G T A G C T C G T A A C G T C G T A T C A G A C G T
A C G T A C G T A C G T A C G T C T G A C G A T C A T G G C T A A T C G G C A T T G A C C T G A A G C T A C G T A C G T A C G T

PH0038.1_Hlx/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TATTATAAGTTATART--
---TGTAATTAATTATGG
 A C G T C T G A A C G T C G A T C G T A A C G T C G T A C G T A T A C G A C G T A G C T C G T A A C G T C G T A T C A G A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C T A G G A C T G C T A C G T A G A C T G A C T C G T A C T G A G C A T C G A T C T G A C A G T C A T G C A T G

PB0174.1_Sox30_2/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TATTATAAGTTATART
NCGTATTATAATCNTA---
 A C G T A C G T A C G T A C G T C T G A A C G T C G A T C G T A A C G T C G T A C G T A T A C G A C G T A G C T C G T A A C G T C G T A T C A G A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A A C G T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TATTATAAGTTATART
GGCCATAAATCAC---
 A C G T C T G A A C G T C G A T C G T A A C G T C G T A C G T A T A C G A C G T A G C T C G T A A C G T C G T A T C A G A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TATTATAAGTTATART
GGCCATAAATCA----
 A C G T C T G A A C G T C G A T C G T A A C G T C G T A C G T A T A C G A C G T A G C T C G T A A C G T C G T A T C A G A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:TATTATAAGTTATART
-GCCATAAATCA----
 A C G T C T G A A C G T C G A T C G T A A C G T C G T A C G T A T A C G A C G T A G C T C G T A A C G T C G T A T C A G A C G T
A C G T T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T A C G T