Information for 8-CAAATCAAGGTGGCCA (Motif 17)

A G T C C G T A C G T A C G T A A C G T A T G C C T G A C G T A A C T G A C T G A C G T A C T G A T C G A G T C A G T C C G T A
Reverse Opposite:
A C G T C T A G A C T G T A G C A G T C C G T A A G T C A G T C A C G T A G C T A T C G C G T A C G A T A C G T A C G T C T A G
p-value:1e-7
log p-value:-1.768e+01
Information Content per bp:1.915
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.2 +/- 22.5bp
Average Position of motif in Background16.9 +/- 5.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CAAATCAAGGTGGCCA
CAAATCACTG------
 A G T C C G T A C G T A C G T A A C G T A T G C C T G A C G T A A C T G A C T G A C G T A C T G A T C G A G T C A G T C C G T A
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.53
Offset:5
Orientation:forward strand
Alignment:CAAATCAAGGTGGCCA-
-----CAAGATGGCGGC
 A G T C C G T A C G T A C G T A A C G T A T G C C T G A C G T A A C T G A C T G A C G T A C T G A T C G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0014.1_Esrra_1/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:forward strand
Alignment:CAAATCAAGGTGGCCA--
-TATTCAAGGTCATGCGA
 A G T C C G T A C G T A C G T A A C G T A T G C C T G A C G T A A C T G A C T G A C G T A C T G A T C G A G T C A G T C C G T A A C G T A C G T
A C G T C A G T G T C A A C G T A G C T T A G C C T G A C T G A C A T G C A T G C A G T A G T C C T G A G C A T T C A G A G T C A C T G G T C A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:CAAATCAAGGTGGCCA
----TCAAGGTCAN--
 A G T C C G T A C G T A C G T A A C G T A T G C C T G A C G T A A C T G A C T G A C G T A C T G A T C G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAAATCAAGGTGGCCA
CCAATCAA--------
 A G T C C G T A C G T A C G T A A C G T A T G C C T G A C G T A A C T G A C T G A C G T A C T G A T C G A G T C A G T C C G T A
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CAAATCAAGGTGGCCA
HNRAATCAAT-------
 A C G T A G T C C G T A C G T A C G T A A C G T A T G C C T G A C G T A A C T G A C T G A C G T A C T G A T C G A G T C A G T C C G T A
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:CAAATCAAGGTGGCCA
NAGGTCACNNTGACC-
 A G T C C G T A C G T A C G T A A C G T A T G C C T G A C G T A A C T G A C T G A C G T A C T G A T C G A G T C A G T C C G T A
T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C A C G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.51
Offset:7
Orientation:forward strand
Alignment:CAAATCAAGGTGGCCA
-------AGGTGTCA-
 A G T C C G T A C G T A C G T A A C G T A T G C C T G A C G T A A C T G A C T G A C G T A C T G A T C G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CAAATCAAGGTGGCCA
----NNCAGGTGNN--
 A G T C C G T A C G T A C G T A A C G T A T G C C T G A C G T A A C T G A C T G A C G T A C T G A T C G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CAAATCAAGGTGGCCA-
-AAATTCAAGTGGNTTN
 A G T C C G T A C G T A C G T A A C G T A T G C C T G A C G T A A C T G A C T G A C G T A C T G A T C G A G T C A G T C C G T A A C G T
A C G T C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A