Information for 5-GAGGATCCGA (Motif 8)

A C T G C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A C T G C G T A A C G T A G T C A G T C A C G T A G T C
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets93.0 +/- 0.0bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GAGGATCCGA
---GCTCCG-
 A C T G C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C T G C G T A
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GAGGATCCGA
TGGGGA-----
 A C G T A C T G C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C T G C G T A
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAGGATCCGA------
GTACATCCGGATTTTT
 A C T G C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

RHOXF1/MA0719.1/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAGGATCCGA
-ATAATCCC-
 A C T G C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C T G C G T A
A C G T G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAGGATCCGA-
-TGGAACAGMA
 A C T G C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C T G C G T A A C G T
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

ETV5/MA0765.1/Jaspar

Match Rank:6
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GAGGATCCGA-
-NACTTCCGGT
 A C T G C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C T G C G T A A C G T
A C G T G A T C T C G A A G T C C G A T C G A T G T A C G T A C A C T G A T C G G A C T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GAGGATCCGA
ANCAGGATGT--
 A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C T G C G T A
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GAGGATCCGA
GGGAGGACNG--
 A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C T G C G T A
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GAGGATCCGA
GTGGAT----
 A C T G C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C T G C G T A
A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GAGGATCCGA
AAGAGGATTAG-
 A C G T A C G T A C T G C G T A A C T G A C T G C G T A A C G T A G T C A G T C A C T G C G T A
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T