Information for 1-CATTGTCGCT (Motif 5)

A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A C T G C G T A A G T C C G T A C G T A A C G T A C T G
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets9.0 +/- 0.0bp
Average Position of motif in Background36.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.79
Offset:-2
Orientation:forward strand
Alignment:--CATTGTCGCT
CTCATTGTC---
 A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C A C G T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CATTGTCGCT
CCWTTGTYYB-
 A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C A C G T
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CATTGTCGCT
CTTTGT----
 A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C A C G T
A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CATTGTCGCT
CCATTGTTNY-
 A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C A C G T
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CATTGTCGCT
CCATTGTTTT-
 A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C A C G T
A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CATTGTCGCT
CCWTTGTY---
 A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C A C G T
A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T A C G T A C G T

PB0070.1_Sox30_1/Jaspar

Match Rank:7
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CATTGTCGCT-
ANNTCCATTGTTCNNN
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C A C G T A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CATTGTCGCT
CCATTGTTYB-
 A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C A C G T
A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CATTGTCGCT
NCCATTGTTY--
 A C G T A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C A C G T
C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CATTGTCGCT
CCTTTGTT---
 A C G T A G T C C G T A A C G T A C G T A C T G A C G T A G T C A C T G A G T C A C G T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T