Information for 6-CAGAAACCCCCTGACT (Motif 15)

A G T C C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T A C T G C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A G T C C G T A A C T G A C T G A C T G A C T G A C T G A C G T A C G T A C G T A G T C A C G T A C T G
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 0.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CAGAAACCCCCTGACT
----CGCCCCCTGACA
 A G T C C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CAGAAACCCCCTGACT
-GGAAATCCCC-----
 A G T C C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T A C T G C G T A A G T C A C G T
A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAGAAACCCCCTGACT
-GGAAATTCCC-----
 A G T C C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T A C T G C G T A A G T C A C G T
A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:4
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CAGAAACCCCCTGACT
-GGAAANCCCC-----
 A G T C C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T A C T G C G T A A G T C A C G T
A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CAGAAACCCCCTGACT
GGGAAATCCCCN----
 A G T C C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T A C T G C G T A A G T C A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CAGAAACCCCCTGACT
ACTGAAACCA-------
 A C G T A G T C C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T A C T G C G T A A G T C A C G T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:7
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CAGAAACCCCCTGACT-
--TGAACCCGATGACCC
 A G T C C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T A C T G C G T A A G T C A C G T A C G T
A C G T A C G T A G C T C T A G C G T A C G T A A G T C A G C T A G T C A C T G C G A T A G C T C T A G C G T A G T A C A G T C A G T C

Mitf/MA0620.1/Jaspar

Match Rank:8
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CAGAAACCCCCTGACT
------NCACGTGACN
 A G T C C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T A C T G C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C

PB0201.1_Zfp281_2/Jaspar

Match Rank:9
Score:0.50
Offset:0
Orientation:forward strand
Alignment:CAGAAACCCCCTGACT-
AGGAGACCCCCAATTTG
 A G T C C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T A C T G C G T A A G T C A C G T A C G T
C G T A C A T G C A T G C G T A C A T G C T G A T G A C G T A C T A G C A G T C G T A C G C T A G C T A C G A T C G A T C G A T T C A G

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.50
Offset:1
Orientation:forward strand
Alignment:CAGAAACCCCCTGACT
-GGAAATTCCC-----
 A G T C C G T A A C T G C G T A C G T A C G T A A G T C A G T C A G T C A G T C A G T C A C G T A C T G C G T A A G T C A C G T
A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T A C G T