Information for 5-AAAGGCCAGAAAC (Motif 11)

C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C G T A G T C A C G T A C T G A C T G A G T C A G T C A C G T A C G T A C G T
p-value:1e-4
log p-value:-1.023e+01
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif33.33%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 0.0bp
Average Position of motif in Background7.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAAGGCCAGAAAC
CAAAGGTCAG----
 A C G T C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----AAAGGCCAGAAAC
ANGNAAAGGTCA-----
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:AAAGGCCAGAAAC
CAAGGHCANV---
 C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AAAGGCCAGAAAC
TCTCAAAGGTCACGAG-
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:5
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------AAAGGCCAGAAAC
AGAGTCCAAAGTCCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AAAGGCCAGAAAC
GGCAAAAGTCCAATAA-
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AAAGGCCAGAAAC
--ATGCCAGACN-
 C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAAGGCCAGAAAC
-AAGGTCAC----
 C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AAAGGCCAGAAAC
TCTCAAAGGTCACCTG-
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AAAGGCCAGAAAC---
AAAGGTAATAAAATTT
 C G T A C G T A C G T A A C T G A C T G A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C A C G T A C G T A C G T
C G T A T C G A T A C G C T A G T C A G A G C T G T C A C T G A C G A T C G T A C G T A G C T A G C T A G A C T C A G T G A C T