Information for 3-GAGTGWKGATTGTGTA (Motif 7)

A T C G C G T A A T C G A C G T A C T G C G T A C A G T A T C G G T C A A C G T A C G T C T A G A G C T C T A G C A G T C G T A
Reverse Opposite:
G C A T G T C A A G T C C T G A A G T C G T C A T G C A A C G T A T G C G T C A G C A T G T A C G T C A A T G C G A C T A T G C
p-value:1e-10
log p-value:-2.470e+01
Information Content per bp:1.705
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.38%
Number of Background Sequences with motif37.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets53.8 +/- 27.3bp
Average Position of motif in Background43.0 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GAGTGWKGATTGTGTA
-----CTCATTGTC--
 A T C G C G T A A T C G A C G T A C T G C G T A C A G T A T C G G T C A A C G T A C G T C T A G A G C T C T A G C A G T C G T A
A C G T A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GAGTGWKGATTGTGTA
---TGTGGATTNNN--
 A T C G C G T A A T C G A C G T A C T G C G T A C A G T A T C G G T C A A C G T A C G T C T A G A G C T C T A G C A G T C G T A
A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A A C G T A C G T

PB0177.1_Sox7_2/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GAGTGWKGATTGTGTA--------
--GTGCTAATTGTGTGTGTACGCT
 A T C G C G T A A T C G A C G T A C T G C G T A C A G T A T C G G T C A A C G T A C G T C T A G A G C T C T A G C A G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GAGTGWKGATTGTGTA--
---NNNCCATTGTGTNAN
 A T C G C G T A A T C G A C G T A C T G C G T A C A G T A T C G G T C A A C G T A C G T C T A G A G C T C T A G C A G T C G T A A C G T A C G T
A C G T A C G T A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

SRY/MA0084.1/Jaspar

Match Rank:5
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:GAGTGWKGATTGTGTA-
--------ATTGTTTAN
 A T C G C G T A A T C G A C G T A C T G C G T A C A G T A T C G G T C A A C G T A C G T C T A G A G C T C T A G C A G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GAGTGWKGATTGTGTA
-AGGVNCCTTTGT---
 A T C G C G T A A T C G A C G T A C T G C G T A C A G T A T C G G T C A A C G T A C G T C T A G A G C T C T A G C A G T C G T A
A C G T C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAGTGWKGATTGTGTA-
NNNNGTTGATTGGGTCG
 A T C G C G T A A T C G A C G T A C T G C G T A C A G T A T C G G T C A A C G T A C G T C T A G A G C T C T A G C A G T C G T A A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G

Sox5/MA0087.1/Jaspar

Match Rank:8
Score:0.53
Offset:8
Orientation:forward strand
Alignment:GAGTGWKGATTGTGTA
--------ATTGTTA-
 A T C G C G T A A T C G A C G T A C T G C G T A C A G T A T C G G T C A A C G T A C G T C T A G A G C T C T A G C A G T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GAGTGWKGATTGTGTA
-NNTGTGGATTSS---
 A T C G C G T A A T C G A C G T A C T G C G T A C A G T A T C G G T C A A C G T A C G T C T A G A G C T C T A G C A G T C G T A
A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:10
Score:0.53
Offset:8
Orientation:forward strand
Alignment:GAGTGWKGATTGTGTA
--------ATTGTT--
 A T C G C G T A A T C G A C G T A C T G C G T A C A G T A T C G G T C A A C G T A C G T C T A G A G C T C T A G C A G T C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T