Information for 18-GTACWGTACA (Motif 39)

A C T G A C G T C G T A A G T C C G T A A C T G A C G T C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T C G T A A G T C C G A T A C T G A C G T C G T A A G T C
p-value:1e-1
log p-value:-4.530e+00
Information Content per bp:1.954
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.7 +/- 17.2bp
Average Position of motif in Background47.8 +/- 22.6bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----GTACWGTACA-
CNNNGCTACTGTANNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C C G T A A C T G A C G T C G T A A G T C C G T A A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GTACWGTACA-
TNNTGCTACTGTNNNN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C C G T A A C T G A C G T C G T A A G T C C G T A A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:3
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------GTACWGTACA
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C C G T A A C T G A C G T C G T A A G T C C G T A
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTACWGTACA----
GGCAAAAGTCCAATAA
 A C G T A C G T A C T G A C G T C G T A A G T C C G T A A C T G A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----GTACWGTACA
CCAGGAACAG----
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C C G T A A C T G A C G T C G T A A G T C C G T A
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:6
Score:0.49
Offset:-7
Orientation:reverse strand
Alignment:-------GTACWGTACA
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C C G T A A C T G A C G T C G T A A G T C C G T A
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:7
Score:0.49
Offset:-4
Orientation:reverse strand
Alignment:----GTACWGTACA---
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C C G T A A C T G A C G T C G T A A G T C C G T A A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0173.1_Sox21_2/Jaspar

Match Rank:8
Score:0.48
Offset:-5
Orientation:reverse strand
Alignment:-----GTACWGTACA--
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C C G T A A C T G A C G T C G T A A G T C C G T A A C G T A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.48
Offset:1
Orientation:reverse strand
Alignment:GTACWGTACA--------
-NNTATTACATGTANNNT
 A C T G A C G T C G T A A G T C C G T A A C T G A C G T C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

PB0106.1_Arid5a_2/Jaspar

Match Rank:10
Score:0.47
Offset:-7
Orientation:reverse strand
Alignment:-------GTACWGTACA
TNNTTTCGTATTNNANN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C G T A A G T C C G T A A C T G A C G T C G T A A G T C C G T A
A C G T A G C T T C G A G C A T G A C T G A C T A T G C A T C G A C G T T G C A A C G T C G A T A C T G G C A T C T G A G A C T T A C G