p-value: | 1e-12 |
log p-value: | -2.891e+01 |
Information Content per bp: | 1.823 |
Number of Target Sequences with motif | 10.0 |
Percentage of Target Sequences with motif | 2.38% |
Number of Background Sequences with motif | 24.9 |
Percentage of Background Sequences with motif | 0.06% |
Average Position of motif in Targets | 61.4 +/- 18.1bp |
Average Position of motif in Background | 52.0 +/- 40.2bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.11 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox2/MA0143.3/Jaspar
Match Rank: | 1 |
Score: | 0.63 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | TRKTMRCMATGGT ----AACAAAGG- |
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Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TRKTMRCMATGGT-- -NGTTGCCATGGCAA |
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RFX4/MA0799.1/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TRKTMRCMATGGT---- -CGTTGCCATGGCAACN |
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SOX9/MA0077.1/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TRKTMRCMATGGT ---GAACAATGG- |
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X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer
Match Rank: | 5 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TRKTMRCMATGGT-- -GGTTGCCATGGCAA |
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Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TRKTMRCMATGGT --VRAACAATGG- |
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RFX3/MA0798.1/Jaspar
Match Rank: | 7 |
Score: | 0.61 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | TRKTMRCMATGGT---- -CGTTGCCATGGCAACN |
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Rfx1/MA0509.1/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | TRKTMRCMATGGT--- --GTTGCCATGGNAAC |
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RFX2/MA0600.2/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | TRKTMRCMATGGT---- -CGTTGCCATGGCAACG |
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PB0159.1_Rfx4_2/Jaspar
Match Rank: | 10 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TRKTMRCMATGGT- NNNGTAACTANGNNA |
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