Information for 7-ACTAGTTCAC (Motif 29)

G T C A A G T C A C G T G T C A A C T G A C G T C G A T A G T C C T G A A G T C
Reverse Opposite:
A C T G A G C T C T A G C G T A G T C A A G T C A C G T C G T A A C T G A C G T
p-value:1e-6
log p-value:-1.403e+01
Information Content per bp:1.827
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif15.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets50.4 +/- 31.3bp
Average Position of motif in Background79.1 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.60
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0168.1_Hnf1b/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---ACTAGTTCAC----
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T G T C A A G T C A C G T G T C A A C T G A C G T C G A T A G T C C T G A A G T C A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

PH0040.1_Hmbox1/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----ACTAGTTCAC---
GAAAACTAGTTAACATC
 A C G T A C G T A C G T A C G T G T C A A G T C A C G T G T C A A C T G A C G T C G A T A G T C C T G A A G T C A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

HMBOX1/MA0895.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ACTAGTTCAC
ACTAGTTAAC
 G T C A A G T C A C G T G T C A A C T G A C G T C G A T A G T C C T G A A G T C
T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-ACTAGTTCAC
AAYTAGGTCA-
 A C G T G T C A A G T C A C G T G T C A A C T G A C G T C G A T A G T C C T G A A G T C
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----ACTAGTTCAC
TATAAGTAGGTCAA
 A C G T A C G T A C G T A C G T G T C A A G T C A C G T G T C A A C T G A C G T C G A T A G T C C T G A A G T C
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

RORA/MA0071.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACTAGTTCAC
ATCAAGGTCA-
 A C G T G T C A A G T C A C G T G T C A A C T G A C G T C G A T A G T C C T G A A G T C
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:ACTAGTTCAC
--AAGGTCAC
 G T C A A G T C A C G T G T C A A C T G A C G T C G A T A G T C C T G A A G T C
A C G T A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C

PB0081.1_Tcf1_1/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACTAGTTCAC-----
NNNTTAGTTAACTNANN
 A C G T A C G T G T C A A G T C A C G T G T C A A C T G A C G T C G A T A G T C C T G A A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----ACTAGTTCAC--
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T A C G T G T C A A G T C A C G T G T C A A C T G A C G T C G A T A G T C C T G A A G T C A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

FOXO3/MA0157.2/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ACTAGTTCAC
--TTGTTTAC
 G T C A A G T C A C G T G T C A A C T G A C G T C G A T A G T C C T G A A G T C
A C G T A C G T G C A T A C G T C A T G A C G T A C G T A C G T G T C A A G T C