Information for 15-AGCATGGGGGACA (Motif 26)

C G T A A C T G A G T C C T G A A C G T A C T G A C T G T A C G A C T G A C T G C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A G T C A G T C A G T C A G T C G T A C C G T A A G C T A C T G A G T C A C G T
p-value:1e-6
log p-value:-1.538e+01
Information Content per bp:1.914
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets23.2 +/- 19.0bp
Average Position of motif in Background71.4 +/- 10.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0128.1_Gcm1_2/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--AGCATGGGGGACA--
TGCGCATAGGGGAGGAG
 A C G T A C G T C G T A A C T G A G T C C T G A A C G T A C T G A C T G T A C G A C T G A C T G C G T A A G T C C G T A A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:forward strand
Alignment:AGCATGGGGGACA
-----TGGGGA--
 C G T A A C T G A G T C C T G A A C G T A C T G A C T G T A C G A C T G A C T G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:AGCATGGGGGACA
-TAATGGCGGNC-
 C G T A A C T G A G T C C T G A A C G T A C T G A C T G T A C G A C T G A C T G C G T A A G T C C G T A
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T

REST/MA0138.2/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---AGCATGGGGGACA-----
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A C G T C G T A A C T G A G T C C T G A A C G T A C T G A C T G T A C G A C T G A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--AGCATGGGGGACA-----
TCAGCACCATGGACAGCTCC
 A C G T A C G T C G T A A C T G A G T C C T G A A C G T A C T G A C T G T A C G A C T G A C T G C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:6
Score:0.53
Offset:5
Orientation:forward strand
Alignment:AGCATGGGGGACA
-----AGRGGTCA
 C G T A A C T G A G T C C T G A A C G T A C T G A C T G T A C G A C T G A C T G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

PB0201.1_Zfp281_2/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-AGCATGGGGGACA---
NNNATTGGGGGTNTCCT
 A C G T C G T A A C T G A G T C C T G A A C G T A C T G A C T G T A C G A C T G A C T G C G T A A G T C C G T A A C G T A C G T A C G T
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AGCATGGGGGACA
-----TRAGGTCA
 C G T A A C T G A G T C C T G A A C G T A C T G A C T G T A C G A C T G A C T G C G T A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AGCATGGGGGACA
CACAGCAGGGGG----
 A C G T A C G T A C G T C G T A A C T G A G T C C T G A A C G T A C T G A C T G T A C G A C T G A C T G C G T A A G T C C G T A
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AGCATGGGGGACA
CAAGATGGCGGC--
 A C G T C G T A A C T G A G T C C T G A A C G T A C T G A C T G T A C G A C T G A C T G C G T A A G T C C G T A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T A C G T