Information for 11-AGTACAGGGGATG (Motif 20)

C G T A C T A G A C G T G T C A A G T C C G T A A T C G A C T G A C T G A T C G C T G A A C G T A C T G
Reverse Opposite:
A G T C C G T A A G C T A T G C G T A C G T A C A T G C C G A T A C T G A C G T C G T A A G T C A C G T
p-value:1e-7
log p-value:-1.777e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.19%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets49.9 +/- 24.7bp
Average Position of motif in Background58.5 +/- 31.7bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)1.80
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:1
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AGTACAGGGGATG
ACTCCAAGTACTTGGAA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T G T C A A G T C C G T A A T C G A C T G A C T G A T C G C T G A A C G T A C T G
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGTACAGGGGATG
CCAGGAACAG------
 A C G T A C G T A C G T C G T A C T A G A C G T G T C A A G T C C G T A A T C G A C T G A C T G A T C G C T G A A C G T A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

FIGLA/MA0820.1/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AGTACAGGGGATG
--AACAGGTGNT-
 C G T A C T A G A C G T G T C A A G T C C G T A A T C G A C T G A C T G A T C G C T G A A C G T A C T G
A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T A C G T

GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:AGTACAGGGGATG---
AGNACANNNTGTNCTN
 C G T A C T A G A C G T G T C A A G T C C G T A A T C G A C T G A C T G A T C G C T G A A C G T A C T G A C G T A C G T A C G T
C T G A C T A G T C G A C G T A A G T C C T G A A T C G C G T A T A G C G A C T A C T G A C G T A G C T A G T C G A C T A T G C

PB0091.1_Zbtb3_1/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AGTACAGGGGATG-
NNNANTGCAGTGCNNTT
 A C G T A C G T A C G T C G T A C T A G A C G T G T C A A G T C C G T A A T C G A C T G A C T G A T C G C T G A A C G T A C T G A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-AGTACAGGGGATG-
VAGRACAKWCTGTYC
 A C G T C G T A C T A G A C G T G T C A A G T C C G T A A T C G A C T G A C T G A T C G C T G A A C G T A C T G A C G T
T G A C C T G A C T A G C T G A C G T A A G T C C T G A A C G T G C A T T A G C G C A T A T C G G A C T G A C T G A T C

ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:7
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-AGTACAGGGGATG--
NAGAACAGNCTGTNCT
 A C G T C G T A C T A G A C G T G T C A A G T C C G T A A T C G A C T G A C T G A T C G C T G A A C G T A C T G A C G T A C G T
T C G A C T G A C T A G T C G A C G T A A T G C C G T A A T C G G C A T T A G C G C A T A T C G G C A T A G C T G A T C G A C T

MF0007.1_bHLH(zip)_class/Jaspar

Match Rank:8
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:AGTACAGGGGATG
----CACGTGNT-
 C G T A C T A G A C G T G T C A A G T C C G T A A T C G A C T G A C T G A T C G C T G A A C G T A C T G
A C G T A C G T A C G T A C G T G A T C C G T A A T G C T A C G G A C T C T A G A T C G A G C T A C G T

Ar/MA0007.3/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-AGTACAGGGGATG---
NGGTACACNGTGTTCCC
 A C G T C G T A C T A G A C G T G T C A A G T C C G T A A T C G A C T G A C T G A T C G C T G A A C G T A C T G A C G T A C G T A C G T
C T A G C T A G C T A G G C A T C G T A T A G C C T G A A G T C A T G C T C A G A G C T A T C G A C G T C G A T G A T C G A T C G A T C

PB0096.1_Zfp187_1/Jaspar

Match Rank:10
Score:0.50
Offset:-5
Orientation:reverse strand
Alignment:-----AGTACAGGGGATG
TTATTAGTACATAN----
 A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T G T C A A G T C C G T A A T C G A C T G A C T G A T C G C T G A A C G T A C T G
C A G T C G A T C G T A G A C T C G A T T C G A C T A G G A C T G C T A A G T C C T G A A G C T C T G A T C G A A C G T A C G T A C G T A C G T