Information for 1-RGTGGRBAKG (Motif 2)

C T A G A C T G C A G T A C T G A C T G C T A G A T G C C G T A A C T G C A T G
Reverse Opposite:
G T A C G T A C G C A T T A C G A G T C T G A C G T A C G T C A G T A C G A T C
p-value:1e-12
log p-value:-2.988e+01
Information Content per bp:1.630
Number of Target Sequences with motif82.0
Percentage of Target Sequences with motif19.48%
Number of Background Sequences with motif3136.8
Percentage of Background Sequences with motif8.08%
Average Position of motif in Targets47.2 +/- 26.2bp
Average Position of motif in Background50.7 +/- 40.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:RGTGGRBAKG
-GTGGAT---
 C T A G A C T G C A G T A C T G A C T G C T A G A T G C C G T A A C T G C A T G
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:RGTGGRBAKG--
RGTGGGYGTGGC
 C T A G A C T G C A G T A C T G A C T G C T A G A T G C C G T A A C T G C A T G A C G T A C G T
C T G A T C A G C A G T C T A G A T C G A C T G G A T C C A T G A C G T C A T G A C T G A G T C

HIC2/MA0738.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:RGTGGRBAKG
NGTGGGCAT-
 C T A G A C T G C A G T A C T G A C T G C T A G A T G C C G T A A C T G C A T G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:RGTGGRBAKG--
RGKGGGCGKGGC
 C T A G A C T G C A G T A C T G A C T G C T A G A T G C C G T A A C T G C A T G A C G T A C G T
C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C

SP8/MA0747.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:RGTGGRBAKG--
AGTGGGCGTGGC
 C T A G A C T G C A G T A C T G A C T G C T A G A T G C C G T A A C T G C A T G A C G T A C G T
C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:RGTGGRBAKG
GGTTGGCAT-
 C T A G A C T G C A G T A C T G A C T G C T A G A T G C C G T A A C T G C A T G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T

KLF16/MA0741.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:RGTGGRBAKG--
-GGGGGCGTGGC
 C T A G A C T G C A G T A C T G A C T G C T A G A T G C C G T A A C T G C A T G A C G T A C G T
A C G T C T A G C A T G C T A G A T C G A C T G G A T C C A T G A C G T C A T G C A T G A G T C

ZNF740/MA0753.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:RGTGGRBAKG-
-GTGGGGGGGG
 C T A G A C T G C A G T A C T G A C T G C T A G A T G C C G T A A C T G C A T G A C G T
A C G T C T A G C A G T C A T G A C T G T C A G C T A G C T A G C A T G C A T G A C T G

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----RGTGGRBAKG--
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T C T A G A C T G C A G T A C T G A C T G C T A G A T G C C G T A A C T G C A T G A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PB0107.1_Ascl2_2/Jaspar

Match Rank:10
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----RGTGGRBAKG-
NATNGGGNGGGGANAN
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G C A G T A C T G A C T G C T A G A T G C C G T A A C T G C A T G A C G T
C T G A T G C A G A C T T C G A C T A G C T A G T C A G G A T C A C T G C A T G A T C G C A T G G C T A A C G T C T G A T A C G