Information for 7-TGVCAGGCAGVCGCTG (Motif 14)

A G C T A T C G T A G C A G T C C G T A A C T G T A C G T A G C C G T A A C T G T A G C A G T C A T C G A G T C C G A T A C T G
Reverse Opposite:
A G T C C G T A A C T G A T G C T C A G A T C G G T A C G C A T A C T G A T G C A G T C C G A T A C T G A C T G A T G C C T G A
p-value:1e-9
log p-value:-2.130e+01
Information Content per bp:1.795
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.95%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets29.6 +/- 19.9bp
Average Position of motif in Background34.0 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGVCAGGCAGVCGCTG
TGAGTGACAGSC----
 A G C T A T C G T A G C A G T C C G T A A C T G T A C G T A G C C G T A A C T G T A G C A G T C A T C G A G T C C G A T A C T G
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:TGVCAGGCAGVCGCTG
-----AGCAGCTGCT-
 A G C T A T C G T A G C A G T C C G T A A C T G T A C G T A G C C G T A A C T G T A G C A G T C A T C G A G T C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TGVCAGGCAGVCGCTG-
-----AGCAGCTGCTNN
 A G C T A T C G T A G C A G T C C G T A A C T G T A C G T A G C C G T A A C T G T A G C A G T C A T C G A G T C C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.56
Offset:6
Orientation:forward strand
Alignment:TGVCAGGCAGVCGCTG
------NCAGCTGCTG
 A G C T A T C G T A G C A G T C C G T A A C T G T A C G T A G C C G T A A C T G T A G C A G T C A T C G A G T C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---TGVCAGGCAGVCGCTG
AGGTGNCAGACAG------
 A C G T A C G T A C G T A G C T A T C G T A G C A G T C C G T A A C T G T A C G T A G C C G T A A C T G T A G C A G T C A T C G A G T C C G A T A C T G
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGVCAGGCAGVCGCTG
CTGGCAGNCTGCCA---
 A C G T A G C T A T C G T A G C A G T C C G T A A C T G T A C G T A G C C G T A A C T G T A G C A G T C A T C G A G T C C G A T A C T G
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A A C G T A C G T A C G T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGVCAGGCAGVCGCTG
BTGABTGACAGS-----
 A C G T A G C T A T C G T A G C A G T C C G T A A C T G T A C G T A G C C G T A A C T G T A G C A G T C A T C G A G T C C G A T A C T G
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TGVCAGGCAGVCGCTG--
-NNNNAGCAGCTGCTGAN
 A G C T A T C G T A G C A G T C C G T A A C T G T A C G T A G C C G T A A C T G T A G C A G T C A T C G A G T C C G A T A C T G A C G T A C G T
A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TGVCAGGCAGVCGCTG
-----GACAGCTGCAG
 A G C T A T C G T A G C A G T C C G T A A C T G T A C G T A G C C G T A A C T G T A G C A G T C A T C G A G T C C G A T A C T G
A C G T A C G T A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TGVCAGGCAGVCGCTG
NTGATTGACAGN-----
 A C G T A G C T A T C G T A G C A G T C C G T A A C T G T A C G T A G C C G T A A C T G T A G C A G T C A T C G A G T C C G A T A C T G
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G A C G T A C G T A C G T A C G T A C G T