Information for 12-GCCAATGAGAARG (Motif 23)

A C T G G T A C T A G C C G T A G T C A A C G T C A T G C T G A C A T G G T C A C T G A C T A G A C T G
Reverse Opposite:
T G A C G A T C A G C T A C G T G T A C A G C T G A T C C G T A C A G T C G A T A C T G A C T G G T A C
p-value:1e-7
log p-value:-1.632e+01
Information Content per bp:1.699
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.11%
Number of Background Sequences with motif227.2
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets46.9 +/- 21.4bp
Average Position of motif in Background47.8 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GCCAATGAGAARG
AGCCAATCGG----
 A C G T A C T G G T A C T A G C C G T A G T C A A C G T C A T G C T G A C A T G G T C A C T G A C T A G A C T G
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----GCCAATGAGAARG
ACTAGCCAATCA-----
 A C G T A C G T A C G T A C G T A C T G G T A C T A G C C G T A G T C A A C G T C A T G C T G A C A T G G T C A C T G A C T A G A C T G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------GCCAATGAGAARG
AAATGGACCAATCAG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C T A G C C G T A G T C A A C G T C A T G C T G A C A T G G T C A C T G A C T A G A C T G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GCCAATGAGAARG--
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T A C T G G T A C T A G C C G T A G T C A A C G T C A T G C T G A C A T G G T C A C T G A C T A G A C T G A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCAATGAGAARG
TGCCAA--------
 A C G T A C T G G T A C T A G C C G T A G T C A A C G T C A T G C T G A C A T G G T C A C T G A C T A G A C T G
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---GCCAATGAGAARG
CGTGCCAAG-------
 A C G T A C G T A C G T A C T G G T A C T A G C C G T A G T C A A C G T C A T G C T G A C A T G G T C A C T G A C T A G A C T G
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCCAATGAGAARG
GGTGCCAAGT------
 A C G T A C G T A C G T A C T G G T A C T A G C C G T A G T C A A C G T C A T G C T G A C A T G G T C A C T G A C T A G A C T G
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCCAATGAGAARG
GACAATGNN----
 A C T G G T A C T A G C C G T A G T C A A C G T C A T G C T G A C A T G G T C A C T G A C T A G A C T G
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T

PB0132.1_Hbp1_2/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----GCCAATGAGAARG
NNTNNACAATGGGANNN
 A C G T A C G T A C G T A C G T A C T G G T A C T A G C C G T A G T C A A C G T C A T G C T G A C A T G G T C A C T G A C T A G A C T G
C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

HOXB13/MA0901.1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GCCAATGAGAARG
-CCAATAAAAC--
 A C T G G T A C T A G C C G T A G T C A A C G T C A T G C T G A C A T G G T C A C T G A C T A G A C T G
A C G T T A G C G A T C G T C A C G T A A G C T C G T A C G T A G T C A G T C A G T A C A C G T A C G T